Galbibacter sp. BG1: HX109_08090
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Entry
HX109_08090 CDS
T06675
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gaa
Galbibacter sp. BG1
Pathway
gaa03030
DNA replication
gaa03430
Mismatch repair
gaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HX109_08090 (dnaE)
03430 Mismatch repair
HX109_08090 (dnaE)
03440 Homologous recombination
HX109_08090 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaa03032
]
HX109_08090 (dnaE)
03400 DNA repair and recombination proteins [BR:
gaa03400
]
HX109_08090 (dnaE)
Enzymes [BR:
gaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HX109_08090 (dnaE)
DNA replication proteins [BR:
gaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HX109_08090 (dnaE)
DNA repair and recombination proteins [BR:
gaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HX109_08090 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Sipho_Gp157
Motif
Other DBs
NCBI-ProteinID:
QLE01527
LinkDB
All DBs
Position
1823627..1828009
Genome browser
AA seq
1460 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDVDNWPRAIQIAWQLHDEMGNVIEHQDYLIKPEGFNIPF
DAEKIHGISTELALEKGYPLQEVLEKFNIALNKTKFVVGQNVGFDVNIMGAEFHRDGMES
SLVDLPVLDTCTETTAELCKIPGGRGGKFKLPTLTELHEFLFNEPFAEAHNATADVEATT
RCFLELIRKEVFTAEELDVSPEYFRNFSEANPQPIELIGLKHINLKKASEEIRKQLAKEA
PSEEISKEELHQNIKELAEVEFAHLHNYSQFSILQATSSIPDLVAATAKANMPAVALTDM
ANMMGAFHFVKEVGNHNKAVQAKIDEALANGEEPTEKLIKPIVGCTLNVCENHLDKSVKD
NGYQIVMLAKNKKGYHNLAKMSSIAYTKGFYYVPRIDKKVVEQYKEDIIVLTGNLYGEVP
SKLLNVGEVQAEESLLWWKEQFGEDLYVEIMRHDQEDENRVNDDLVKLANKHQVQLVATN
NTYYIGKEDANAHDILLCVKDGEKKDTPIGRGRGYRYGLPNQEYYFKSSDEMKAIFKDLP
DAIFNIQGIIDKIEPFELARDVLLPAFTIPEEFQVEEDKHDGGKRGENIYLYHLTYEGAK
KRYPEITDEIRERLDFELSVIENTGYPGYFLIVQDFIAAAREMDVSVGPGRGSAAGSAVA
YCLGITNIDPIHYDLLFERFLNPDRVSLPDIDIDFDDEGRSRVMEYVIEKYGANQVAQII
TYGTMAAKSSIRDTARVLDLPLHDADRIAKLIPNMKLAKIFGLDDAKLKSSLRAEELEKV
NELKNIAEGDDLEALTVNQARVLEGSVRNTGIHACGVIITPDDITKFVPVSVAKDSDLYV
TQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKLVKYKHGIDLNPDEFPLDDEKTYELFQR
GETVGIFQYESAGMQKHMKDLKPTVFADLIAMNALYRPGPLEYIPSFIKRKHGEEEIKYD
LDAMEEYLKETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKIFALLEQLKPKFLD
GGEAKGHSRETLEKVWKDWEAFASYAFNKSHSTCYAWIGYQTAYLKANYPAEYMAAVLSN
NMNDIKQVTFFLEECKRMGIEVLGPDVNESYYKFTVNKDNAIRFGMGAIKGVGRGAVETI
VSGREDGRYKSVFDLAKRIDLRAANKKAFENLALAGGFDSFTDTHRAQYFHDEGDGITFL
EKAIKYGAKFQENENSAQVSLFGEASDVQIPEPQVPPCDTWGTMEKLKREKEVVGIYISG
HPLDDFKTEIEVFCNGNVGAFNNLEALVNREVSFAGVISDVQHRVSKNGKGWALFTVEDY
TDSYEFRMFGEEYLKFRHFLMINSFIYIKAFVREGWTNRETGKKGDPRLQFNSMEQLQDV
MDKYARKLTIHLKLEELLEERIDSLKEVISMHKGDHILNFVVYEMENEIKLTMPSRKQKV
HISNELLSELKEQEVVYKLN
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgtacctaatttttgatacagaaaccaccggtttaccaaaacgttgggatgcccccatt
accgatgtcgacaactggccaagagccattcaaattgcatggcagttgcacgacgaaatg
gggaatgttatagaacatcaagattatctcattaaaccagaaggctttaatatccctttc
gatgccgagaaaattcacggtatttccaccgaattagcgctagaaaaagggtatccactc
caagaggtattggagaaatttaatattgccttaaataaaaccaagtttgtggtggggcaa
aacgttggtttcgatgtaaatattatgggtgccgaattccatcgcgatggcatggagagc
agcttggtagatttaccagtattggacacctgcaccgaaactactgcagagctttgtaaa
atcccgggagggcgtggtggaaaatttaagctccccactttaaccgagcttcatgagttt
ttatttaatgaaccttttgcagaagcccacaatgccacggccgatgttgaggcgacaaca
cgctgctttttggaattaatccgtaaagaagtttttactgcggaagaattggatgtctct
ccagaatacttcaggaatttctctgaagccaatccgcagccaattgagctgattggttta
aaacacatcaatcttaaaaaagcttccgaagaaataaggaaacaactggctaaggaggcg
ccttccgaagaaatatccaaagaagagcttcatcaaaatatcaaagaacttgctgaggtt
gagtttgcacacctgcacaactattcgcagttctccattttacaggccacatcgagcatt
cccgatctagtagcggcaacggcaaaagcgaacatgccagctgtagcgcttaccgatatg
gcgaatatgatgggggcttttcattttgtaaaagaagtaggaaaccacaacaaagcagtc
caggctaaaattgacgaagcgctagccaatggcgaagaaccaacggaaaaactgattaaa
cccatcgttggttgtacgctgaacgtctgtgaaaatcacttggataagtcagttaaagac
aatggttaccaaattgtgatgctcgccaaaaataaaaaagggtaccataatttggctaaa
atgtcttctatagcctatacgaagggattttattacgttccgcggattgataaaaaagta
gtggaacaatacaaagaagacattattgtgcttacggggaatttatatggggaagtgccc
agtaaattgttaaatgttggtgaagtacaggccgaagaatccttgttgtggtggaaagaa
caatttggggaagatttgtacgtggaaattatgcgccacgaccaagaggatgaaaaccga
gtgaatgatgatttggtgaaattggcaaataagcaccaagtacagctagtagctaccaat
aatacttattacattgggaaagaagatgccaatgcgcacgatattttattatgcgtaaaa
gatggggagaaaaaagacacccctataggtcgcggtcgcgggtatcggtatggcttgcca
aatcaagagtattactttaagagtagcgacgaaatgaaggctatttttaaagatcttcca
gacgctatttttaacatacagggaattatagataaaattgagccttttgaattggcccgg
gatgttttattacctgcgtttaccattccagaagagtttcaagttgaagaagataagcac
gatggtggtaaaaggggagagaatatatacctctatcacctcacttatgaaggtgctaaa
aagagatatcctgagattactgatgagataagggagcgactcgattttgagttgagtgtt
attgaaaacactggttatcctggatattttttaattgtacaggactttatagcagcggcg
cgggaaatggatgtttctgttggcccgggacgtggatcagcggcgggatctgcagttgct
tattgtttggggattaccaatatagatcccattcactacgacctactttttgagcggttt
ttgaatccagaccgtgtgtcccttcccgatatcgatattgattttgatgatgaaggacgt
agccgggttatggagtatgtgattgaaaaatatggtgccaaccaagtagcacaaattatt
acctatggtaccatggccgccaaatcctccattcgagacacggcgcgagtactggatttg
cctttgcacgatgccgatagaattgccaagctaattccaaatatgaagctggccaagata
tttggtttggatgatgccaaattaaaaagcagtctaagggcagaagagctggagaaggta
aatgagcttaaaaatattgctgaaggagacgatctggaggctttaacagtaaatcaagcc
agggttttagaaggttctgtaaggaatacgggaatccatgcttgtggggtaattattacc
cctgatgatattaccaagtttgtaccggtttccgtagctaaagattctgatttatatgta
acacagttcgataactcggttgtggaaagtgcggggctgttaaagatggattttcttggg
ttaaaaacgctgacccttattaaggataccgtaaagctcgtgaaatataaacacgggatt
gacttaaatcctgatgaatttccgttggacgatgagaaaacctacgaactttttcagcgt
ggggaaacggtagggatatttcagtatgaatctgctgggatgcagaaacacatgaaagat
ctgaagcccaccgtttttgccgatcttattgcgatgaatgccctttaccgccctgggcct
ttggagtacattccgagttttattaaaagaaaacacggagaagaagagattaagtacgat
ctcgatgccatggaagaatacctcaaagaaacttatggaattacagtttaccaagagcag
gtgatgttgctgtcgcaaaaactggctggttttaccaaaggtgaagccgatgttttacga
aaagcgatgggtaaaaagatatttgccctgctggaacaactaaagcctaagtttttagat
ggtggggaagcgaaaggtcactcccgtgaaaccctagaaaaggtttggaaagactgggag
gcatttgccagttacgcctttaacaagtcccactccacttgctatgcatggattggttac
caaacagcttatttaaaggcaaattaccctgcggaatatatggcggctgtactgtctaat
aatatgaacgatattaagcaggtaaccttctttttagaggaatgtaaacgtatggggatt
gaagtgttggggccagatgtgaatgagtcttactataaattcaccgtaaataaagacaat
gcgatccgttttggaatgggtgccattaaaggggttggccgtggtgcggtggaaaccatt
gtttctggaagggaagatggtaggtacaaatcggttttcgatcttgccaaacgcatcgac
ttaagggctgccaataaaaaagcgttcgaaaatttagctttggctggaggtttcgattct
tttaccgacacgcatcgtgcccaatattttcatgacgagggcgatgggatcacttttctg
gaaaaagccattaagtatggtgcaaaatttcaggaaaatgaaaactctgcacaggtaagt
cttttcggcgaagccagtgatgtgcaaataccagaaccacaggtgccaccatgtgatact
tggggaactatggagaaactgaagcgggagaaggaagtagtgggaatttatatttctggt
caccctttggatgattttaaaaccgaaatcgaagtattttgcaatggaaatgtgggagct
ttcaataatttagaagctttagtaaatcgcgaagtttcgtttgcgggtgtaatttccgat
gtgcaacatcgagtttccaaaaatggaaaggggtgggcgctctttacggttgaagattat
accgatagctatgaatttagaatgtttggtgaggaatatttaaagttccgtcacttctta
atgatcaattcttttatctatatcaaagcgtttgtgcgggaaggttggaccaaccgggag
acgggaaaaaaaggggatccccgtcttcaatttaattccatggagcaactgcaggacgta
atggataaatatgcgcgaaaactcacgatacatttgaagttggaagagctactggaagaa
cgaattgattccctcaaggaggttatttccatgcataaaggggatcacatcttgaacttt
gtagtgtacgaaatggaaaatgaaataaagttaaccatgcccagtagaaaacaaaaagta
catatttccaatgaattgttaagtgaattaaaagagcaagaggtcgtttacaaactaaat
tga
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