Galbibacter sp. BG1: HX109_11940
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Entry
HX109_11940 CDS
T06675
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gaa
Galbibacter sp. BG1
Brite
KEGG Orthology (KO) [BR:
gaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaa03016
]
HX109_11940
Enzymes [BR:
gaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HX109_11940
Transfer RNA biogenesis [BR:
gaa03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HX109_11940
Prokaryotic type
HX109_11940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QLE02233
LinkDB
All DBs
Position
2742010..2742927
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AA seq
305 aa
AA seq
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MSNLNKLHILGCYSATPRAFTNPTAQALELKNHIFLIDCGEGTQVQLRKQKIKFARVKHI
FISHLHGDHFFGLPGLLSTFRLLGREAPIHVYGPKGIKNAVVTMLKVGQAWTNYPLHFHE
LKSEASELIFEDENVEVHTVPLKHRVYTNGFLFKEKEGDRKLNINAVNEYGIDTCYFQNI
KKGKDVVLESGETVPNEVLTLDPPAPKSYAFCSDTSYSEAIVPIINNATLLYHESTFLNE
HEALALQTGHSTAKQAATIAEKANVKKLILGHYSTRYKDLKMFQDEAKEFFGNTELAEDG
KTFLF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccttaataaactacatattctgggctgttacagcgcaacaccgagggctttt
accaaccctacagcgcaagccctagaactaaaaaatcatatatttttaatagattgtgga
gaaggcacgcaagtgcagctgcgcaaacaaaaaataaaatttgctcgggtaaagcatatt
tttatttcgcatttacacggtgatcatttcttcggtcttccgggattgctttctacattt
cgtttattagggagggaagctccaattcacgtttatggtccaaagggaataaagaacgca
gtggttaccatgttgaaagtagggcaggcttggacaaattatcccttacattttcacgaa
ttaaagtcagaagcttccgaattgatctttgaagatgagaacgtagaagtacataccgtt
ccgcttaaacacagggtttatacaaacggatttctttttaaagaaaaagaaggcgatcga
aaactcaatataaatgcggtgaatgagtatggaattgacacctgttattttcagaatata
aaaaaaggtaaagatgtagttctagaaagtggagaaacagtgccaaacgaagttttgaca
ctcgatccaccagcccctaagagttatgcgttttgcagtgatacgtcttacagcgaagcc
atagtgcccataataaacaatgcgacacttctttatcacgaatccacgtttttaaatgaa
cacgaggcgttggcgctacaaactgggcattctaccgctaaacaggctgctaccatagcc
gagaaagcaaatgttaaaaaactaattttaggtcattattcaacgcggtataaagactta
aaaatgtttcaggatgaagctaaagaattttttgggaatacagaattggcagaggatggt
aaaacctttttattctga
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