Galbibacter sp. BG1: HX109_13450
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Entry
HX109_13450 CDS
T06675
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gaa
Galbibacter sp. BG1
Pathway
gaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HX109_13450 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaa03019
]
HX109_13450 (recQ)
03400 DNA repair and recombination proteins [BR:
gaa03400
]
HX109_13450 (recQ)
Enzymes [BR:
gaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HX109_13450 (recQ)
Messenger RNA biogenesis [BR:
gaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HX109_13450 (recQ)
DNA repair and recombination proteins [BR:
gaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HX109_13450 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HTH_11
zf-CXXC
Sigma70_r4_2
HTH_28
FAA_hydrolase
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QLE02513
LinkDB
All DBs
Position
complement(3110865..3112973)
Genome browser
AA seq
702 aa
AA seq
DB search
MIQEAVIYNTLKEYFGYESFRPLQKEIIDTLIAGEDCLVIMPTGGGKSICYQLPAMLLNG
LTIVISPLIALMKDQVDGLQVNGIPASFLNSSQSSSEQDAIFKSIETKETKLLYVAPESL
SYLENIFSTVEVSLIAVDEAHCISSWGHDFRPAYTQLGFLKNRFPNTPLIALTATADKAT
REDIAQQLNIPNARKYVASFDRKNLSLEVRPGTDRLPQIIQFLNKRPNESGIIYCLSRKA
TENIAEKLRKSGFNAQAYHAGLGHEDRSKTQEDFINDKTEIVCATIAFGMGIDKSNVRWV
IHYNMPKNLEGYYQEIGRAGRDGLPSSTLLFHSYADVVQLQQFAEKSGNSEVQMAKLERM
KQYAEALSCRRKILLSYFGEFLEEDCGNCDVCKNPPQFFDGTIIAQKALSCVTRLREQEN
IGMVIDVLRGSHNQQVIEKGFQHVKTYGIANDISWRDWQHYIIQMVNLGYLEIAFHLKNT
LKLTPQANEVLFNNQKVALTKPQEKIVTETTTTKQTKTKDSLFERLRQLRLSIAKEEDIP
AYLIFNDATLKEIEAERPVTDEDFMHINGVGRRKMENYGYQFIKEIIAFNKEKEKKKARK
KGSTYLETFKLYQDGLSIEEMAKKRKLSSTTIYSHLVKLYEEGKEIDLMQFISKNDLESV
KEAQIKLEHPDHLKTYYEYFEEAIDYWTIKICLTVIENPKSS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgatacaagaagctgttatttacaatacccttaaagaatattttggatacgaatccttt
cgtccactccaaaaagaaattatagataccctaattgcgggagaagattgcttggtaatt
atgcctaccggtggcggaaaatctatttgttaccaacttccggctatgttattaaacgga
cttaccattgttatttcaccacttattgctttaatgaaagatcaagtagacggtcttcaa
gtaaatgggattcccgccagttttttaaatagcagtcagtcttcatcggagcaggacgct
atttttaaatccattgaaactaaagaaacaaaacttttatacgtagccccagagagcctt
tcttatttggaaaatatatttagtaccgtggaagtaagcttaattgcggtagatgaagca
cattgtatctcctcttggggacacgattttagacctgcttacacccaacttggattttta
aaaaataggtttccaaacacaccgcttatcgcactcacagccaccgcagataaggctaca
cgggaagatattgctcaacaactcaacattcccaatgcgagaaaatacgtagcttcgttc
gatagaaaaaatttaagtttagaagtacgacctggcaccgatagactgccgcaaattatt
cagtttttaaataaacgacccaatgaaagtggtatcatttattgtttaagcagaaaagct
actgaaaatattgccgagaaacttagaaaatcaggatttaacgcccaggcctatcatgcc
gggttgggacatgaagaccgatctaaaacccaagaagactttataaacgataagaccgaa
attgtgtgtgccaccatcgcttttggaatgggaatcgataaatccaatgttcgctgggtt
atacattacaacatgccaaagaatttagagggctattaccaagaaattggccgtgcagga
agggatggcctcccctcttccaccctgctattccatagttatgccgatgttgtgcaactc
caacaatttgcggaaaaatctggaaattcagaggtgcaaatggcaaaattggaacgaatg
aagcagtatgcagaagcactttcttgccgtagaaaaattttattgagctatttcggggaa
tttttagaagaagattgtggaaactgcgatgtctgtaaaaaccctccacagtttttcgat
ggaaccataatagctcaaaaagcattgtcttgtgtaacccgtctaagggaacaggaaaat
attggaatggttatcgatgtgttaagaggatcccataatcaacaagtaatagaaaaagga
ttccaacatgtaaaaacctacggcattgctaatgatatttcgtggcgtgattggcagcat
tatataattcaaatggtgaatttgggatatttggaaattgcatttcatttaaaaaacact
ttaaaacttacgccacaggcaaatgaggtgctttttaacaatcaaaaagttgctttaacc
aagcctcaggagaaaattgttacagagactacgaccacaaaacaaacgaaaacaaaagac
tccttatttgagaggttacgccaattacgcctctccatagcgaaagaagaggacataccg
gcttatttaatctttaatgatgccacccttaaagaaattgaagccgaaagaccagtaacc
gatgaagattttatgcacattaatggcgttggacgtagaaagatggaaaactacggatat
caatttataaaagagatcattgcttttaacaaagaaaaagaaaagaaaaaagccagaaaa
aaaggatctacttacctagaaacatttaaattataccaagacggattgagtattgaagag
atggctaaaaaacgaaaattaagcagtaccacgatatactcgcatctggttaaactttat
gaagaaggtaaagaaattgatttaatgcaatttataagtaaaaatgatctggaaagtgta
aaagaagctcaaattaaattagagcatccagatcatctaaaaacctactacgaatatttt
gaagaagccatagattactggacgataaagatatgtcttactgtaatcgaaaatcctaaa
agcagttaa
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