Galbibacter sp. BG1: HX109_14165
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Entry
HX109_14165 CDS
T06675
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gaa
Galbibacter sp. BG1
Pathway
gaa03030
DNA replication
gaa03430
Mismatch repair
gaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HX109_14165
03430 Mismatch repair
HX109_14165
03440 Homologous recombination
HX109_14165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaa03032
]
HX109_14165
03400 DNA repair and recombination proteins [BR:
gaa03400
]
HX109_14165
Enzymes [BR:
gaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HX109_14165
DNA replication proteins [BR:
gaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HX109_14165
DNA repair and recombination proteins [BR:
gaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HX109_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
QLE02646
LinkDB
All DBs
Position
complement(3260270..3263230)
Genome browser
AA seq
986 aa
AA seq
DB search
MYLNCHTYYSLRFGAFSEVELLELAQENEARQLVLTDINNTSACLNFIRKAPEYNIKPIV
GIDFRNGVQQEFVGIAKNNTGFEVLNTFLSTCLHTESEIPKRAPKLNDVFIVYPFEKVML
NAMENFEKNEFIGVSVTDLRKLPFSKYIQFRDKLVVQQPVTFRNKKDFNAHRLLRAIDNN
TLLSKLPREEEASEEEKMYPVTNLYQAFSTYSFILENTDRLLKQCDIFFDFSAKKQSQNQ
QTYSGSLSEDAAMLEKLCLDNVNQRYPEPSKKVFDRMWMELELIKKMNFISYFLINHDIV
SYAKQQGFFHVGRGSGANSIVAYLLGITDVDPLELDLYFERFLNLFRSAPPDFDIDFSWR
DREDVTRYIFNRFPHVALMGTYVTFKYKGVVRELGKVFGLPKEEIDRLSEGLYRKEDLDE
LSLLVLRYGRLIQGMPNYVSVHSSGIIIAERPLQYFSATFLPPKGFVTVQFDMHIAEDVG
LYKFDILGQRGLAKIKEALQIIICNQPENKDFDIHNVNAFKKDPVINNMLKKGQCMGCFY
VESPAMRMLISKLKVDNYLGLVAASSIIRPGVAKSGMMREYILRHHDPERIQQAHPVLLE
IMPDTYGVMVYQEDVIKVAHHFADLTLGEADVLRRGMSGKYRSRDEFKAVEEKFIANCRK
KGYKDEVTFEVWKQIESFAGYAFAKGHSASYAVESYQSLFLRAYFPLEYMVAVLNNGGGF
YRSEIYIHEARMLGATIHAPCINNSMAETVIYGKHIYLGFAFLRDLEARTCAKLLKNRSE
FGDFTSLENFLDRISISIEQISILIRINAFRFTGIDKYELLWKAHFSLGHLQRFEAQHQL
FRLQQRNYEIPLLQTTNLEVAFEQLELLGFTLCSPFDLLVEAPRTSFTVENFPAMLHKTI
DIYGYLVTVKRTNTQHRKEMFFGTLLDQEGKVFDMVLFPPVAAKYRFRGKGIYRIYGKVV
SEFNFLSIEVIKMRKEDYIQDPRFAD
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttaattgccacacatattacagtttaaggtttggagctttttctgaagtcgaa
ctcttggagttagcccaggaaaacgaggcgcgacagctggtgttaaccgatattaataat
acttctgcctgcttaaattttattcggaaggcaccggaatacaacatcaaaccaatcgta
ggcatcgactttaggaatggtgtgcagcaagaatttgtggggattgcaaaaaacaatacg
ggttttgaagtccttaacacatttttatccacttgtctccatacggaaagtgaaatcccc
aaacgagctccaaagttgaatgacgtttttatagtgtatccctttgaaaaagttatgctc
aacgccatggaaaactttgaaaaaaatgaattcataggtgtttcagtaaccgatcttaga
aagcttccgttttccaaatacattcaatttcgggataaattggtagtgcagcagccggtt
accttcagaaataaaaaagattttaacgcccaccggcttttacgtgcgatagataataat
acactactaagtaaactgccaagagaggaagaggcttcggaagaagaaaaaatgtaccca
gtaaccaatttgtaccaagcatttagcacctattcctttattctggaaaatacagatcgt
cttttaaagcaatgcgatattttttttgatttttcagccaaaaaacagagtcagaatcaa
caaacatacagtggcagtctatcggaagatgcagcaatgttggaaaaactgtgtttggac
aatgtcaaccagcgctatccagaaccttccaaaaaagtgttcgaccgcatgtggatggaa
ctcgaattgataaaaaaaatgaattttatctcctattttttaattaaccacgatatcgtt
tcctacgccaaacagcaaggtttttttcacgtagggcggggtagtggtgccaatagcatt
gtggcatatttactgggaattaccgatgttgaccctttggagttggatctttattttgaa
cgttttttgaatttgtttagaagcgccccaccagattttgatatcgatttctcttggagg
gatcgggaagacgttacccggtatatttttaacaggtttccccatgtggctttaatgggc
acgtatgtaacttttaaatacaagggtgtggttagggaattgggtaaggtttttggtttg
cccaaagaggaaatagacagactgagtgaagggctttaccgcaaggaagatttagacgaa
ctttcgctgctggtgctgcgttatggaaggttaattcaaggaatgcctaactatgtgagt
gttcattccagcggaattattattgctgaacgtcccctgcagtatttctcggctactttt
ttgccgccaaaaggtttcgttacggtccaatttgatatgcatatagctgaagatgtggga
ctgtataaatttgatattcttgggcagcggggattggcaaaaataaaagaagcacttcaa
attattatatgtaaccaacctgaaaataaagattttgacattcataacgtgaatgctttc
aaaaaagatccggttattaataacatgctaaaaaaagggcagtgcatggggtgtttttac
gtggaatccccggcaatgcgcatgctcattagtaaattaaaagtggacaattacttggga
ctggttgcggccagttcaattattaggccaggggtagcaaaaagcggaatgatgcgggag
tacattttacggcatcacgatcctgaacggatacagcaagcacaccctgtgcttctggaa
attatgcccgacacttatggtgttatggtataccaggaagatgtaattaaagtagcacac
cactttgcagaccttaccttgggggaagctgatgttttgcgtaggggaatgagcgggaaa
tatagatccagggacgagtttaaagcggtagaagagaaattcatagccaattgtagaaaa
aaagggtacaaagatgaagttactttcgaagtctggaagcaaatagaaagctttgcaggc
tatgcctttgccaaagggcactctgcttcctatgccgtagaaagctatcaaagtttattt
ctacgtgcctatttccctttggaatatatggtagcggttttaaataacggaggtggattc
tatagatctgaaatttacattcacgaagcgcgaatgctgggagctactatccatgcccct
tgtattaacaacagcatggcagaaactgttatttatggaaagcacatttatttgggattt
gctttcttaagggatttggaagcaaggacctgcgctaaactattaaaaaacagaagtgag
tttggagattttacatcactggaaaattttttggaccgtatttccataagtatagagcaa
ataagtattcttattcgcattaacgcatttagatttaccggaatagataaatatgaactg
ctttggaaggctcattttagtttgggccatctgcagcggtttgaggcacaacaccagttg
tttagattgcaacagcgcaattacgagattcctcttttgcaaaccacaaaccttgaagtc
gcttttgaacagttggagctactgggctttaccctctgttccccgtttgatctactcgta
gaagccccaagaacgagctttacggtagaaaatttcccagctatgctccacaaaaccatc
gatatctatgggtatttggttactgtaaagcgcaccaatacacagcaccgtaaagaaatg
ttttttggtacattgctagatcaagagggaaaggtttttgatatggtcttgtttcctccc
gttgccgccaaataccgatttaggggaaagggaatctacagaatttatggaaaagtggtg
agtgaatttaattttttgagcattgaggttataaaaatgcgcaaagaggattacatccaa
gacccgagatttgctgattga
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