Gossypium arboreum (tree cotton): 108449907
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Entry
108449907 CDS
T05776
Name
(RefSeq) auxin response factor 19 isoform X1
KO
K14486
auxin response factor
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108449907
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
108449907
NCBI-ProteinID:
XP_017602778
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Position
7:104196225..104202686
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AA seq
1119 aa
AA seq
DB search
MKAPPNGFLANPAEGERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKE
TDFVPSYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYDREALLASDMGLKQSR
QPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHENPWTFRH
IYRGQPKRHLLTTGWSVFVSNKRLFAGDSVLFIRDEKSQFLLGIRRANRQQPALSSSVIS
SDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMF
ETEECGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERPTRVSIWDIEPVVTP
FYICPPPFFRPRFPKQPGMPDNENDVENAFKRAMPWLGDDFGMKDSPNSIFPGLSLVQWM
NMQQNNQFAAAQSGLFPSMVSSNPLHSSLGTDDPSKLLNFQAPMLPASNMQFNKANPNQV
NQLSQAPMTWPQQQQLQQLLQTPLNQNPQQQLQQRQSQLQPQSHLQQQPQPQPPLQQQQQ
QQQRQQAQPQPQQQQPPLQQLQQQQRQQAQPQLLQQQFLPAQVNNGIIASNQMPNQNLHQ
PGVYSQIQQQQQQQQILTSNGQSTQTTLPANKASYPLTSLAQDTQIQQQVEQQPNLVQSQ
QQQTQLQQNLSQRSQQQPQIQQLAQQGLSEQQFQLLQKLQQQQQSSQQLLSPTGSLSQSP
VVQQQPMHQQNQPMQQVPLSQSQQTLGSNGFSTSMLMQPQQLVVSQSQNQNKPLMAMRTH
SGLTDGDAPSCSTSPSTNNCQVSPSSFLSRSQQVPSMVVTDPVVEPASTLVQELQSKPDI
RIKHELLASKGPDQSKYKSTVTDQLEASSSGTSYCLDAGTIQHNFSLPTFLEGDVQSHPR
SNLQFSANIDGLAPDTLLSRGYDSQKDLQNLLSNYGSNPRDIDTELSTAAISPQSFGVPN
IPFKSGCSNDVAINDAGVLNGGLWANQTQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRH
DLARMFGIEGQMEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSLEVQQM
SLDGDLGNVPVPNQACSEIDSGNAWRGHYDDTSAASFNR
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctccacccaatggatttttggcaaatcccgcagaaggagaaaggaagagtatc
aattcagaattatggcatgcttgtgctggaccacttgtttctttaccgccagttggaagt
ttggtggtttactttcctcaaggccatagtgaacaagttgcagcatcgatgcagaaggag
actgatttcgtaccaagctaccctaatcttccttccaagttaatttgcatgctccataat
gtcacattgcatgctgacccggaaaccgatgaggtctatgctcagatgactcttcaacct
gtaaacaaatatgacagagaagcattactagcatctgatatgggcctcaagcaaagcaga
caacctgctgagttcttttgcaagacgcttacagctagtgacactagcactcatggtggc
ttttcagtgcctcgtcgagcagctgagaagatcttccctcctttggatttttcgatgcaa
ccacccgctcaagagctacaagctagagatttacatgagaatccatggacatttagacat
atctatcgaggtcaaccaaagaggcatcttctaactactggttggagtgtctttgttagc
aacaaaagactttttgctggtgattctgttcttttcataagagacgagaagtcacagttt
ctcttaggtataaggcgggccaatagacagcagccagctctctcttcatcagtaatttct
agtgatagcatgcatatagggatccttgctgctgcagctcatgctgctgcaaataacagc
ccatttaccatattctacaatccaagggcaagcccttccgagtttgtggtacccttggcg
aagtataacaaagccatgtatacccaagtttctcttggaatgcggtttagaatgatgttt
gaaaccgaggagtgcggagtacgtagatacatgggtacgattactggtatcagtgacctg
gatcctgtacgatggaagaattcacagtggcgcaatcttcaggtaggatgggatgaatct
actgctggtgagcgaccaacccgagtttcaatttgggacatcgagcctgttgtaactcct
ttctacatatgcccaccaccgtttttcaggcctagattccccaagcaaccgggaatgcca
gataatgaaaatgatgttgagaatgcttttaagagagctatgccttggcttggagatgac
tttggcatgaaagattcccccaattcaatcttccctggtttgagtttagttcagtggatg
aacatgcaacaaaataatcagtttgcagctgctcaatctggactctttccttcaatggtt
tcttcgaatccattgcacagtagccttggcactgatgatccatccaagttattgaatttt
caagctccgatgttacctgcgtcaaatatgcaatttaacaaagcaaatccaaaccaggtc
aaccagttgtctcaggcacctatgacctggccccagcaacagcaactccagcagttattg
cagactcctctgaatcaaaatccacaacagcagttacagcaacgacagtcacagctgcag
ccacagtcacatcttcaacagcagcctcagcctcagccacctctacagcagcagcagcag
caacaacaaagacaacaggcacagccacaaccacagcagcagcagccacctctacagcaa
ctgcaacaacaacaaagacaacaggcacaaccgcagctgctgcaacaacaatttctacca
gctcaagtaaataatggcatcattgcctcaaaccagatgccaaatcaaaatttgcatcag
ccaggtgtttattctcagattcagcaacagcagcagcaacaacaaatattgacaagcaat
ggccagtcaactcaaaccacccttcctgctaataaggcttcatatcctttgacatcgtta
gctcaagatacacagattcagcaacaggtggaacagcaacctaacctcgtacagagccaa
cagcaacagacacagttgcagcaaaatctgtcccagaggtcacaacagcagccacaaatt
caacaactggcacagcagggcctctcagagcaacaattccaattattacagaaattgcag
caacagcagcagtcgtctcaacaattactctcacctactggatcactgtcgcagtctcca
gtggtgcaacaacagccaatgcatcaacaaaaccaaccaatgcagcaggtgcctctttct
cagagccaacagacacttggcagcaatggtttctcaacatcaatgctaatgcaaccacaa
cagctagtggtgagccaatcccaaaatcagaacaagccacttatggcaatgagaacccat
tctggtcttactgatggagatgctccatcatgttcaacctcaccttctaccaataattgt
caggtttcaccatcaagcttcctaagcagaagtcagcaagtaccatccatggtagtgaca
gatccagttgttgagcctgcaagtacactggttcaggagcttcagagcaagcctgatatc
cgaatcaaacacgagttgcttgcctctaaaggtccagatcaatcaaagtacaaaagtact
gtgacagaccagttagaagcatcctcttctggaacatcatactgcctggatgcaggcacc
atccagcataatttctctctccccacctttttggaaggtgatgtccaatcacatcctcgg
agcaatcttcaattttcagctaatattgacggactggcacccgacaccttgttatcaagg
ggatatgactctcaaaaggatcttcaaaatctgctttctaattatggtagcaatccaaga
gatattgacacagagttgtctactgctgcaataagtccccagtcatttggtgtgccaaac
atacctttcaagagtgggtgttcaaatgatgttgccataaacgatgcaggagttctaaat
ggtggattgtgggccaaccaaactcaacggatgcgaacatatacaaaggtgcaaaagcgt
ggctctgtgggaagatcaatcgatgtgacccgctacaaagggtatgatgaactcaggcat
gatctagcccgcatgtttggtatcgagggacagatggaagatccacaaagttctgactgg
aaattagtatatgttgaccatgaaaatgacatattacttgttggtgatgatccttgggaa
gaatttgtaagttgtgttcagagcattaaaattctgtcatcccttgaagtacaacaaatg
agcttggatggtgaccttggaaatgtgccagttcccaatcaggcttgtagtgagatcgac
agtggaaatgcatggagaggacattatgatgatacttcagccgcctcttttaacagataa
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integrated database retrieval system
