Gossypium arboreum (tree cotton): 108450002
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Entry
108450002 CDS
T05776
Name
(RefSeq) tRNA dimethylallyltransferase 9 isoform X1
KO
K00791
tRNA dimethylallyltransferase [EC:
2.5.1.75
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00908
Zeatin biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00908 Zeatin biosynthesis
108450002
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gab01006
]
108450002
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108450002
Enzymes [BR:
gab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.75 tRNA dimethylallyltransferase
108450002
Prenyltransferases [BR:
gab01006
]
Compound prenylation
tRNA dimethylallyltransferase
108450002
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
108450002
Prokaryotic type
108450002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IPPT
IPT
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_33
ResIII
Zeta_toxin
AAA_28
TsaE
Cytidylate_kin
ABC_tran
ATPase_2
RNA_helicase
AAA
AAA_5
IstB_IS21
TIP49
Rad17
PhoH
Hpr_kinase_C
AAA_25
AAA_14
SLFN-g3_helicase
T2SSE
Adeno_IVa2
AAA_11
NPHP3_N
RuvB_N
cobW
Motif
Other DBs
NCBI-GeneID:
108450002
NCBI-ProteinID:
XP_017602902
LinkDB
All DBs
Position
5:84039679..84044556
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AA seq
447 aa
AA seq
DB search
MISSGIYSLRSIRLPQRPIFPSLCNGRKTLVTSSTSVSVNQKKEKVIVISGPTGAGKTRL
ALELAKRLNGEIISADSVQVYRGLDVGSAKPSPADRQEVPHHLIDILHPSEDYSVGQFFE
DARQATKDILRSGRVPIVTGGTGLYLRWYIYGKPDVPKASREVAAQVYSEVADFERDGDW
EAAVQLVVDAGDPKAQSLAANDWYRLRRSLEIIRSSGSPPSAFQVPYDSFRNQNDPSETI
DTCHLKPSADELEQHKVKDLDYEFICFFLSSPRLDLYRLIDLRCEHMLSDGILSEARWLL
DTGLLPNSNSATRAIGYRQAMEYLLYCREQGGMSSTRDFYYFLSEFQKASRNFAKRQLTW
FRNEHIYHWLNASRPLDKVLNFIYNAYNDQSGTLHVPESLQMKKDMSNKREAAELKAYRA
KNRHFVHREDCSDILDWIRSTQELIVV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgatatcgagtggaatttacagccttcgaagcatccgattgcctcaaagacccatattt
ccttcactttgtaatggtagaaaaaccttagttacaagctcaacttctgtttctgtcaac
cagaagaaagagaaggtgattgtaatatcagggccaactggggcaggcaaaactaggctt
gctttggaacttgctaagcgtctcaatggtgaaatcatcagtgctgactctgttcaggtt
tatcgaggtcttgatgtgggatctgcaaagccttctccagctgatagacaggaagtgcca
catcatctgattgatattttgcacccatctgaagactattctgtaggacaattttttgag
gatgctaggcaagcgacaaaagatattcttcgtagtggccgtgttcccattgttactggt
gggactggattgtatttgcgatggtatatatatggaaagccagatgttccaaaggcctct
cgagaagttgcagctcaagtatattctgaggttgccgattttgagagagatggagactgg
gaggctgccgtgcaattggtggttgacgcaggtgatccgaaggcgcagtctttggctgcc
aatgattggtatcgcttaagacgtagccttgagataatcaggtctagtggatcacctcca
tctgcttttcaagtaccatatgattcttttcgaaatcaaaatgacccaagtgaaacaatt
gacacttgtcacttaaagccttctgctgacgaactcgagcaacataaagtaaaggatttg
gactatgagttcatttgttttttcctctcaagtcccagacttgatctctataggcttatt
gatctgcggtgtgaacatatgctttcggatggtattttgtccgaggctagatggcttctg
gacacaggtcttcttccaaattcaaactctgcaactcgagcaattggttatagacaggca
atggaatacctactgtactgtagggaacaagggggcatgagttccactagagacttctat
tattttttatccgaatttcagaaagcgtctaggaattttgcgaaaagacaactaacttgg
tttcgaaacgagcatatttatcactggctgaatgcttctagaccactggataaggtgctt
aacttcatttacaatgcatacaacgaccaaagtggaactttacatgtgcctgaatcactt
caaatgaagaaagatatgtcaaacaaacgagaagctgctgaactaaaggcttatcgtgct
aaaaacaggcattttgtccaccgcgaagattgttcagatattctagactggataaggagt
actcaagagctaatcgttgtttaa
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