Gossypium arboreum (tree cotton): 108450017
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Entry
108450017 CDS
T05776
Name
(RefSeq) transcription factor IIIA-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108450017
03021 Transcription machinery [BR:
gab03021
]
108450017
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108450017
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
108450017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-met
zf-H2C2_2
Zf-C2H2_ZNF451_1st
zf-C2H2_jaz
zf-C2HE
RRM_PARP14_3
Zap1_zf1
zf-C2H2_7th_ZNF462
Motif
Other DBs
NCBI-GeneID:
108450017
NCBI-ProteinID:
XP_017602924
LinkDB
All DBs
Position
5:9948205..9951511
Genome browser
AA seq
360 aa
AA seq
DB search
MDEEKGERVSGPMFKDIRRYFCDHCGICRSKKSLITTHILTHHPEKIDNGGKEEEEVSMS
NECQECGATFRKPAHLKQHLQSHSLERPFVCLVDDCHASYRRKDHLNRHLLQHQGKLFSC
PIENCNSKFAFQGNMKRHVKEFHDEGSSSSDAASQKQYVCQEVGCGKVFKFASKLRKHED
SHVKLDSVEAFCSEPSCMKYFTNEQCLKAHVQSCHQYINCQICGAKQLKKNIKRHLRSHE
SGVASERIKCDFGGCLHTFSTKSNLRQHVKAVHEELKPFACSFSGCGMRFSYKHVRDNHE
KSALHVYVPGDFIESDEQFRSRPRGGRKRTCPTVEMLIRKRVAPPQMDTMMDPGPIQGCS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaaaaggagaaagagtatcaggaccaatgttcaaagacataaggcgttat
ttctgtgatcattgtggaatttgcagatctaagaagtctctcatcaccacccacatccta
acccaccacccggagaaaatagacaatggaggaaaggaagaagaggaagtttccatgtcg
aatgaatgccaagaatgtggtgctactttcaggaagcctgctcatttgaagcaacacttg
caaagccactctctcgagaggccatttgtttgtttagttgatgattgccatgctagctat
aggagaaaagaccatttgaatcgtcaccttcttcagcaccaaggaaaacttttcagttgt
ccaattgagaactgcaatagcaaatttgcgtttcaaggcaacatgaaaaggcacgtgaaa
gaatttcatgatgaaggttcatcttcctctgatgctgcaagccagaagcaatatgtctgc
caggaagtaggatgtggaaaagtgttcaagtttgcatcaaagctgagaaagcatgaagat
tctcatgttaagctggattcagttgaagccttctgttctgaaccaagttgcatgaaatat
tttactaatgagcaatgccttaaggctcatgtgcaatcatgccaccaatatattaattgt
caaatatgtggggcaaagcagctgaagaagaacatcaagcggcaccttcgatcacatgaa
tcaggagttgcatcagaaagaattaagtgtgattttgggggttgtctccatacattttca
actaaatcaaatctgcgtcagcatgtcaaggctgtgcatgaagaactcaagccttttgca
tgtagcttctctggttgtgggatgagattttcatacaagcatgtcagagataaccatgag
aaatcagcactccacgtttatgttccaggggacttcatagagtcggatgagcagtttcgg
tcaaggccaaggggtgggcggaaaagaacatgtcccactgtggaaatgcttattcgaaaa
agagttgctccaccacaaatggatacgatgatggatccagggcctattcagggttgctct
taa
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