KEGG   Gossypium arboreum (tree cotton): 108450063
Entry
108450063         CDS       T05776                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108450063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108450063
   03036 Chromosome and associated proteins [BR:gab03036]
    108450063
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108450063
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108450063
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 EIF3I Beta-prop_ACSF4 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR41 WD40_RFWD3 Vitelline_membr RES
Other DBs
NCBI-GeneID: 108450063
NCBI-ProteinID: XP_017602993
UniProt: A0ABR0PVQ2
LinkDB
Position
5:9682628..9687561
AA seq 348 aa
MSTFGAAAANHNPNKSFEVAQPPSDSVSSLSFSPKANFLIATSWDNQVRCWEISRNGTAV
ASTPKASITHDQPVLCSTWKDDGMTVFSGGCDKQVKMWPLLSGGQPMTVAMHDAPIKEVA
WIPEMNLLATGSWDKTLKYWDTRQSNPVHTQQLPDRCYALTVKYPLMVVGTADRNLIVFN
LQNPQNEYKRVTSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDGQQGKNFTFKCHR
DGSEIYSVNSLNFHPIHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSTFNNDGS
IFAYSVCYDWSKGAENHNPSTAKSYIFLHLPQESEVKGKPRVGTSGRK
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgtctacttttggtgccgccgctgccaatcataaccctaataaatcgtttgaggttgct
caaccacccagtgattctgtttcaagccttagcttcagtcccaaggccaatttcttgatt
gctacttcatgggataatcaggtgagatgttgggaaatttcccggaatggtacagctgtt
gctagtacgccaaaggcatcaattactcatgatcagccggttttgtgctcaacctggaag
gatgatgggatgacagtcttttctggaggctgtgacaagcaggtcaaaatgtggccttta
ttatctggtggtcaaccaatgacagttgccatgcatgatgcccctattaaagaagttgct
tggatcccagaaatgaacctgttagctacaggaagctgggacaagacattaaaatattgg
gatacaaggcagtcaaacccagtgcatactcaacaacttcctgatcgctgctatgcactc
acagtgaaatatccattgatggttgttggtaccgcagataggaatctgatagtctttaac
ttgcagaatcctcagaatgaatacaagagagtcacctcacccctcaagtatcagacaaga
tgtgttgctgccttccctgaccagcaaggttttttggttggttcaattgagggaagggtt
ggtgtacaccaccttgatgatggacaacagggtaaaaactttacttttaaatgccacagg
gatggcagtgagatatattctgtcaactcattaaacttccatcctatacatcacactttt
gccactgcggggtctgatggtgctttcaatttctgggacaaggatagcaaacagagacta
aaggcaatgtcaaggtgcagtcaacctataccatgcagtactttcaacaatgatggatca
atattcgcatattcggtttgttatgactggagtaagggtgctgaaaatcacaacccatca
acagcaaaatcctacattttcctgcacttgccacaggaatctgaagttaaaggcaagcca
agagttggaacaagtggtagaaagtga

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