Gossypium arboreum (tree cotton): 108450076
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Entry
108450076 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108450076
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108450076
Enzymes [BR:
gab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
108450076
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
108450076
NCBI-ProteinID:
XP_017603010
UniProt:
A0A0B0MBF1
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Position
5:19941783..19947988
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AA seq
675 aa
AA seq
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MTSKVRRIIDCFSDCSGCKTCKGNARQDMLNMNQDTNCDPMLTQGVRLHIQDRYVVMDNG
IIQVSLSKPGGIVTGIWYNGIDNLLEVRNKETNRGYWDLHWNEIGGKGIFDVIQGTSFRV
IVENEEQVEISFTRTWNHSLEGKYIPLNIDKRFIMLRGSSGFYSYAIYEHFREWPGFELG
ETRITFKLRKDKFQYMAVADNRQRYMPFPDDQSNGRGVPLAYPEAVLLVNPLDQRLTGEV
DDKYQYSCENKDLRVHGWICFDPPVGFWQITPSDEFRSGGPLKQNLSSHVGPTTLAMFLS
SHYAGKYMVPQFEAGEPWKKVFGPIFMYFNSAAYGNDPLLLWEDAKIKMMVEVQSWPYSF
PASEDFPKSEQRGNANGRILIQDRYISNYCVIASGAYVGLAPPGDAGSWQMESKNYQFWT
QANEDGFFSIRNIRPGDYNLYAWVPGFIGDYRHEAVITIISGCNIEMGDVIYEPPRDGPT
LWEIGIPDRSAAEFYIPDPDPKYINRLFVNHPDRFRQYGLWERYTELYPEGDLVYKIGVS
DYRKDWFFAQVVRKIGDNAYQGTTWQIKFELDNVDRNGIYKLRVALASATLAELQVRVKD
PNSNRPLFTTGLIGRDNAIARHGIHGIYKLYNVDIPGTRFVKGENTIFFKQPRCNSPFQG
FMYDYIRLEGPSTPC
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaaagtgcggagaatcatagattgtttcagtgactgtagtggctgtaaaaca
tgtaaaggaaatgcaaggcaagatatgttgaacatgaatcaggatacaaattgtgaccca
atgctgactcagggagtccgactgcatattcaagaccgttatgttgtaatggataatggc
ataattcaagtctcactatcaaaaccagggggtattgttacgggaatatggtataatggg
attgacaatttgcttgaagttcgaaacaaggaaactaatagagggtactgggacctgcac
tggaatgaaataggaggcaagggaatatttgatgtgatccaaggaacaagttttagagtt
atagtggaaaatgaggaacaagttgagatctcattcacaagaacttggaatcactccctg
gagggcaagtacattcccctaaatattgataaaaggtttataatgcttcgtggttcatct
ggcttttactcctatgccatctatgagcatttcagggaatggcctggttttgagcttgga
gaaaccagaattactttcaagctcagaaaagacaagtttcaatacatggctgtagcagat
aacaggcaaagatacatgcccttccctgatgaccaatcaaatggaagaggcgtacctttg
gcttatccagaagcagtcctacttgtcaatcccctagatcagaggctaacaggagaggtg
gatgacaagtaccagtattcatgtgagaataaagatcttcgggttcatggttggatctgc
tttgatccacctgttgggttctggcaaatcacaccaagtgatgagtttagatctggtgga
cctcttaaacagaacctaagctcacatgtaggacccaccactctggctatgtttcttagt
tcacattatgctgggaaatatatggttccacaatttgaagctggggagccatggaagaaa
gtttttggccctatttttatgtattttaattccgcagcctatggaaatgacccacttttg
ctgtgggaggatgctaagatcaagatgatggttgaagttcaaagctggccatacagtttc
cctgcttcggaggatttcccgaagtctgaacaacggggtaatgctaatggcagaatatta
atccaagacaggtatatcagcaattactgcgtaatagctagtggtgcatatgttggcttg
gctcctccaggagacgcaggatcatggcaaatggaaagcaagaactatcaattctggacc
caagcaaacgaggatggctttttctccattagaaatatacgccctggtgactataatctg
tatgcatgggtccctgggtttattggagattaccggcacgaagctgtcattaccataatc
tcaggttgtaacattgaaatgggtgatgtgatatatgaacctccaagagatggaccaaca
ttgtgggaaataggcatccctgatcggtcagctgcagagttctatattcctgatcctgat
ccgaagtatatcaataggctttttgtcaaccatcctgacaggtttaggcagtacgggttg
tgggagagatatacagaactatatcctgaaggagacttggtttacaaaattggggttagt
gactacaggaaagattggttctttgcacaggtggtcaggaagataggcgataatgcatat
caaggaactacatggcaaatcaagtttgaactcgataatgttgatcggaatggtatctac
aaattgcgagtggcacttgcatcagctactctagctgaattgcaggttcgggttaaggac
ccaaattcaaatcggcctctgtttacaactggactgatagggagggacaatgcaatagcg
agacacgggattcatgggatctacaagctgtacaatgtggacatacctggtactcgattt
gttaaaggggaaaataccatcttctttaaacaaccaagatgcaacagtcctttccaagga
ttcatgtatgactacatccggttagaaggtccctcaactccatgttaa
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