Gossypium arboreum (tree cotton): 108450166
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Entry
108450166 CDS
T05776
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gab03110
]
108450166
Chaperones and folding catalysts [BR:
gab03110
]
Heat shock proteins
HSP100
108450166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_18
AAA_14
bpMoxR
AAA_7
IstB_IS21
ATPase_2
RuvB_N
AAA_28
TniB
DUF815
NBD_SMAX1
NACHT
TsaE
RNA_helicase
Zeta_toxin
Roc
AAA_25
DUF87
Mg_chelatase
ABC_tran
AAA_19
DNA_pol3_delta2
T2SSE
ResIII
Torsin
DUF2987
DASH_Spc19
AAA_13
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
108450166
NCBI-ProteinID:
XP_017603167
LinkDB
All DBs
Position
7:96422659..96426474
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AA seq
912 aa
AA seq
DB search
MNPDKFTHKTNEALAASHELAMSNGHAQFTPLHLAVSLISDPTGIFPQSISNAGGENAAQ
SAERIFNQALKKLPSQSPPPDEIPASTSLIKVLRRAQAAQKARGDTHLAVDQLILGLLED
SQIADLIKEAGVAPAKVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQAGKLDP
VIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRVIA
LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEKYEG
HHGVRIQDRALVVASQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
MQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMKYRKEKQRVDEIRRLKQKR
EELMFALQEAERRYDLARAADLRYGAIQEVESAIAQLEGTTDENIMLTETVGPEHIAEVV
SRWTGIPVTRLGQNEKERLIGLAERLHQRVVGQNQAVEAVSEAVLRSRAGLGRPQQPTGS
FLFLGPTGVGKTELAKALAEQLFDDENQLIRIDMSEYMEQHSVARLIGAPPGYVGHEEGG
QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL
GAEHLLSGLSGKSSMQVARDRVLQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKVARLQM
KDVAVRLAERGIALAVTDAALDYILAESYDPVYGARPIRRWLEKRVVTELSRMLVKEEID
ENSTVYVDASPKRNELVYRVEKNGGLVNAATGQKSEVLIQIPNGQPRSDAAQAVKKMKIE
EMDEDEDEEMDM
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgataaattcactcacaagacaaatgaagctctggccgcctctcacgagcta
gcgatgagcaacggccatgcccaattcacccctcttcaccttgctgtttctttaatctcc
gatcccactggcattttccctcaatctatctccaatgccggtggtgaaaacgctgctcaa
tctgccgagaggatctttaatcaggccttaaagaaactcccatcacagtcgcctccgccg
gatgaaatccccgctagcacttcccttattaaggtactccgtcgtgcccaagctgcgcaa
aaggcacgcggcgacacccatttggccgtcgatcaattgattctcggccttctcgaggat
tcccagatcgctgatttgataaaggaagctggtgttgctccggcaaaagtgaaatccgaa
gtagaaaagcttcgaggaaaggaagggaagaaggtagaaagtgcttcaggggatactaca
tttcaagctctaaagacttatggccgtgatcttgttgagcaagcaggaaaacttgatccg
gtgataggccgagatgaagaaatccgaagggttattcggattctatcaaggagaacgaag
aacaatccggttctcataggagaaccgggtgtcggtaaaactgcagtcgtagagggcttg
gctcaaaggattgttagaggggatgttcctagtaatcttgctgatgtgagagttatcgcg
ttggacatgggggcgttagttgctggagcaaaatatcgaggtgaattcgaggaaagattg
aaggctgtattgaaagaagttgaggaagccgaagggaaagtgattctcttcatcgatgaa
atacatttggtacttggggccggtcgaaccgagggctccatggatgcggccaacctcttt
aagcctatgcttgctcgaggtcaacttcgatgtattggtgcaacgacactggaggaatat
aggaagtatgttgagaaggatgctgcattcgaaagaaggttccaacaggtttatgtcgct
gagccgagcgttgctgatacaatcagcatccttcgagggttgaaagaaaaatacgaaggt
caccatggtgttcggatacaagaccgcgctttggtggtggcatcacagttatcgagtcgc
tacattacaggacgtcatcttcctgacaaggcgattgacttggtcgacgaagcttgtgcg
aatgtgagagttcagcttgacagtcagcctgaagagattgataatctcgaacgaaaacga
atgcaattagaagtcgagctgcacgctttggaaaaggagaaggataaagctagcaaagct
cgactggttgaagtacggaaggagcttgatgacttgcgagacaagcttcagccgctgatg
atgaaatataggaaggagaagcaaagggttgatgagatccgacgattgaaacaaaagaga
gaagagctcatgttcgccttacaggaggctgaaagaagatatgatttggcaagagctgcg
gatttgagatatggagcaattcaggaagtggaatctgcgatagcgcagcttgaaggaacc
acagatgaaaatataatgttaacagaaacggttggaccggaacacattgcagaggttgta
agccgctggactggcattcctgtcacgaggctcggacagaatgagaaagagaggttgatt
gggcttgctgagaggctgcatcaaagagtggtgggacaaaatcaagcggttgaggctgtt
tcagaggctgttttgaggtcgagagctggattaggaagacctcaacaaccgactggctcg
ttccttttcttgggtccaactggtgttggaaaaacagaacttgctaaggcactggcggaa
caactcttcgatgatgagaaccagcttatcaggattgacatgtccgagtacatggagcaa
cactcagttgctcgacttattggtgcaccaccaggatatgtcggacacgaggaaggtggg
caactaaccgaggctgtaaggcgaaggccatacagtgttgtattattcgatgaagtcgag
aaagcacatatctctgtcttcaacacactgcttcaagtgctggatgatggtcgattaact
gatggccaaggccgcactgtcgacttcagaaacacggtgatcatcatgacatcaaacctt
ggagccgaacatcttctgtctgggcttagtggaaaatcttctatgcaagttgcacgtgat
cgcgtattgcaagaggtacggcgacactttaggccggagttgcttaacagacttgatgag
attgttgtttttgatccgctctcacacgaccaattgaggaaagttgctaggttgcaaatg
aaggatgtggcagtccgacttgctgagaggggaattgcattggctgtaacggatgcagct
ctggactacatattagcagagagttatgatccagtttacggtgcgaggcctataaggaga
tggctggagaaaagggttgtaacggagctgtcgagaatgttagtgaaagaagaaatcgat
gagaactccacagtgtatgttgatgcgagtcccaaaagaaacgagttggtgtatcgggtg
gagaaaaatggaggcttagttaacgctgccaccggccaaaaatcagaggtattgatccaa
atcccaaacgggcagccaagaagcgatgctgcgcaggcagtgaagaagatgaagattgaa
gagatggatgaggatgaggatgaggagatggatatgtaa
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