Gossypium arboreum (tree cotton): 108450244
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Entry
108450244 CDS
T05776
Name
(RefSeq) transcription factor SPATULA-like isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108450244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108450244
Transcription factors [BR:
gab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108450244
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
CENPU
Motif
Other DBs
NCBI-GeneID:
108450244
NCBI-ProteinID:
XP_017603266
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Position
5:complement(18455544..18459315)
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AA seq
333 aa
AA seq
DB search
MADLYGGAPYSNPETEEISTILNQLLHNSSSSSSSSSSCMQFKGKNIHSFPSQVPGISTP
AANSGSGMGIPVMDRYRLGGLAVRIESEPGVNISDPETYFGANVKDSADNALSSACDFSY
DSEKVPDASEVPSNQERPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTD
KASMLDEAIEYLKQLQLQVQMLSMRNGLSLYPMCLPGVPQSMQMPPTGLGYDEGHGFFSP
NIGAGTFSSNEERSMNTPFNLSNPCTISNLPVAAPSVANVSNLEASIGFESPAGAHYGSF
THSTSSKEICKEGRSQIELEMNHGGNSTSSGVS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctgtacggtggtgctccttattcgaatccggaaactgaagaaatctccact
atccttaaccagctccttcacaattcctcttcttcgtcatcttcatcatcttcctgcatg
caattcaagggcaagaacattcactcttttccttctcaagtgccgggaatttcaacgccg
gctgctaactccggctcggggatgggaattccggttatggatcggtaccggctcggcgga
ttggctgttcgaatcgaatcagagcctggagtcaatatctctgatcctgaaacgtatttt
ggagctaacgttaaagatagcgctgacaatgcgttatcttctgcctgcgatttcagttat
gacagcgagaaggttccggacgcatcggaggtgccatcaaatcaagaacggccacggagt
tcatcgaagcgcagcagagcagccgaagtccataatttgtcggaaaagaggaggaggagt
cggattaatgagaaaatgaaagctttacagaatctaatcccgaactctaacaagacggat
aaagcttctatgcttgacgaggcgatcgagtatttgaaacaacttcagcttcaagtacag
atgttatcgatgagaaatggattgagtttgtacccaatgtgcttaccaggagtaccacag
tcaatgcaaatgcctcccacaggcttgggctatgatgagggacatggattcttcagtccc
aacatcggagcaggcacattttcttcaaacgaagaaagatcgatgaatacaccttttaat
ctttcgaatccatgcaccatctcaaatctgccagtcgctgcaccttctgtagctaacgtg
tctaatttggaagcttcaatcggttttgaatcacctgctggggcacactatggatccttc
acccactcaacctcttccaaggaaatttgtaaggaaggcagatcacagattgaattagag
atgaatcatggtgggaatagcacttcatcaggtgtgtcttag
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