Gossypium arboreum (tree cotton): 108450260
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Entry
108450260 CDS
T05776
Name
(RefSeq) protein NEDD1-like
KO
K16547
protein NEDD1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108450260
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gab04812
]
108450260
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
108450260
Microtubules and associated factors
gamma-tubulin ring complex
108450260
Cytoskeleton proteins [BR:
gab04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
108450260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_RFWD3
PQQ_2
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_WDR11_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
NYD-SP28_assoc
Beta-prop_NWD2_C
bZIP_2
Motif
Other DBs
NCBI-GeneID:
108450260
NCBI-ProteinID:
XP_017603290
UniProt:
A0A0B0MMP9
LinkDB
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Position
5:complement(39219604..39225085)
Genome browser
AA seq
791 aa
AA seq
DB search
MMNRPDPSLELLAASGGDTVKIFDIKLEPNDPCVLSYSPSPSCFVNSVRWNHTNLVVASA
GEDKKISLWRKNGQRMWTVPVAGTDCGDNIEESILAISFINKGSRYICSGGSGQVVRIWD
LQRKRCIKWLRGHTSTITGVMYNCKDEHLASISQSGDLILHNLASGARAAELKDPNEQVL
SVLDYSRISRHILVTAGDDGSIHLWDTTGRSPKVSWLKQHSAPTTGISFSPSNDKVIASV
GLDKKLYTYDTGSRRPSTFISHEAPFTSLAFRDDGWTLAAGTNNGRVAFYDLRGKLQPFT
FLGAYSSSEAVSSLCWQRSKPVIVNETTCAAETALLGGPVEDSVLMPDPLPSVTSLSLSV
STAISGGRSGPAEVSFLTSRSESVSSTGNLSSSMETPHRSHLWPGGTLTRLHAPHSKYSL
KDDMDVFSPVVDVQPITPSLDKLWDIHEGAKKEHLLADKRPSSLLFPSSRRFAFADDGAG
DHPIFDWKSSSISQQDDTRSLTSLRSMPTPSSKSEEASITPPEAWGGDKISDKFAHLRHL
PSRFGMEASGGMTTSYTYSGQTQSSMLSQTSISSLTSNDISYENLRTKDVSSSQETSLGF
PEHLSSSLSALSLGSKGITGAGSLDSPKLASLGLPRRFSTYAERISTTSAFSDGTSQLVV
SPKTKKTGAETREELLNSLLLRSDSFTGEESGILPAMNGGTQLHKAPQPDPQQGSNFTLQ
LFQRTLEETLDSFQKSIHGDMRNLHIEILRQFHMQEMEMSCVMRSILQNQAELMEEVKSL
RKENQQLRQLL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgaccggatccgtcgctggagttactagcggcgagcggcggcgacaccgtg
aaaatcttcgacattaagctcgaaccgaacgatccttgcgttttaagttactcaccttct
ccgagttgctttgtcaattcggttaggtggaaccacactaacttagtggtagcgagtgcc
ggagaagataagaagatatctttgtggcggaaaaatgggcagaggatgtggacagttccg
gttgctgggactgattgtggagataacattgaggagtctattttagctattagctttatc
aacaaggggtccagatacatatgttcagggggaagtggtcaagttgtacggatatgggat
ttgcaaaggaagcgttgcatcaaatggttaaggggtcatactagcacaattacaggtgtt
atgtacaattgcaaagatgagcacttggcctccatcagccaaagtggggatctcattctt
cataaccttgcttctggggcaagggctgctgaactaaaagatcctaatgaacaggtactg
agtgtacttgattattctcggatcagccgacacattttggtgactgctggtgacgatgga
tctatccatttatgggataccaccggtcgtagcccaaaggtttcctggttgaagcagcac
tctgcacccacaactggcattagcttctcaccatccaatgataaggtaattgctagtgtt
gggttggataagaagctatacacctatgatactgggtctagaagaccctctactttcatt
tctcatgaggcacctttcacttcattggcatttagagatgatggttggacactggcagct
ggcaccaataatggtagagtagcgttctatgatcttcggggaaaactacagccttttact
ttccttggtgcttatagcagttctgaggctgtttcaagtttatgctggcaaagatcaaaa
ccagtaattgttaatgagactacttgtgctgctgagactgctctcttggggggtccagtg
gaggattcagttcttatgcctgacccacttccatctgtgacatcattgagcctttcagta
tccacagcaatttctggtggccgatcaggccctgcagaagtatcttttcttacaagtagg
agtgaatcagtgtcaagcacaggcaatctgtcttcttctatggaaacaccacatagaagc
catctgtggcctggtggaacactgacgagattacatgctcctcactctaagtacagtctc
aaggatgatatggatgtgttttcccctgttgtggatgttcaaccgattacaccctcactc
gataagttgtgggatattcatgagggtgcaaaaaaagagcatctactcgctgataagagg
ccctcctcccttctgtttccctctagcaggaggtttgcttttgctgatgatggagctggt
gatcacccaatatttgattggaagtccagttcaatatctcaacaggatgacacaagatct
ttgacgtcattacgatctatgcctacaccatcatccaagagtgaagaggcctccatcact
cctcctgaagcgtggggtggtgataagatatctgataaatttgctcacctccgtcatctg
ccatctcgatttgggatggaggcttctggtggtatgacaacaagctatacttattctgga
caaactcaatcttcaatgctcagtcagacaagtattagctcattaacaagtaatgacata
agctatgaaaacttgcgcacaaaagatgtctcttcaagtcaggagacgtcactaggattt
cctgaacatttatccagctccttgtctgctttgtctcttggttcaaaaggcattactgga
gcaggcagcctcgactcaccaaaactagcatctttagggctgcctcgaaggttttcaaca
tatgctgagagaattagtactacatctgccttcagtgacggaacttcccaattggtggtt
tcccccaaaacaaagaaaacaggagctgaaaccagagaagagctgttgaatagcttgtta
ttgaggtctgattcatttactggagaagaatcaggaattcttccagctatgaatggagga
acacagctccacaaggctcctcaacctgatccccagcaaggaagtaacttcactcttcag
ctatttcaacgtactcttgaagaaacccttgattcatttcagaaatccattcatggagat
atgaggaaccttcatattgaaatcttaagacaattccacatgcaggagatggagatgtct
tgtgtgatgcgctccattttacagaaccaagctgaactgatggaagaggttaagtctctc
cggaaagaaaaccagcagcttcgtcagttgctttga
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