Gossypium arboreum (tree cotton): 108450274
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Entry
108450274 CDS
T05776
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108450274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108450274
03036 Chromosome and associated proteins [BR:
gab03036
]
108450274
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108450274
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108450274
PBAF complex
108450274
GBAF(ncBAF) complex
108450274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
108450274
NCBI-ProteinID:
XP_017603314
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All DBs
Position
5:15409233..15413315
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AA seq
464 aa
AA seq
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MAEKSPVKEAASSESIPISNSNQLKPSPQFPSKFSSQTAPNSEVPSTPTSRPPSADADVV
YVPSYSRWFSWDKIDSCESRFLPEFFDGRSASKGPGLYIYYRNSIIKLFRVNPSRKITFT
DVRKTLVGDVGSIRRVFDFLDHWGLINYSASSALSKPSKDTGSNIKSSDSPSVESPSSAA
PTSKHSSNSRRICGACKSLCTIACFVCDKYDSTLCARCYVRGNFRVGLSNADFRRVEITD
EAKADWSEKETLLLLEAIMHYGDDWKKVAQHVGGRTDKDCVAHFVKLPFGEEYLRHPLSN
DDESGFETNKRMCLTPLADASNPIMAQAAFLSALAGVEIAEAAAQAAVSVLSQVDDVTAS
RVGIGSLERNSKRESEISSNGDTNQNALERAAYAVANSLLDKEELDIERAITGITEVQMK
EIQDKFLRFEEMDLQTEKERQQLESMKNLLFIDQLNLSFCRNYT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaatcaccggtgaaagaagctgcttcctcagagagcatccccatctcgaac
tcaaaccagttgaagccatctccccaattcccctccaaattctcttcccaaacggcaccc
aactctgaagtcccctccacgcccaccagccgtcctccttccgccgatgccgacgtcgtt
tacgtccccagctactcccggtggttctcgtgggataagatagactcttgcgagtcccgt
ttccttccggagtttttcgacggtcgctcggcttccaaaggccctggtctttacatttat
tacaggaactcaattataaagctattcagggtaaacccttcccgtaagattaccttcact
gacgtcaggaagactcttgttggtgatgttggatccattcggagggttttcgatttcctt
gaccactggggtctcatcaattactctgcctcctctgctctttccaagccctccaaagat
actggttctaacattaaatcctcagattccccttctgttgaatccccttcttctgctgcc
cccacctccaaacactcctctaattccaggcgaatctgtggggcgtgcaagtctctttgt
accattgcttgcttcgtttgcgacaagtatgactccaccctgtgtgcaaggtgttatgtt
cggggcaatttcagggttggtctaagcaatgctgatttcaggcgggtagagatcactgat
gaagccaaggcagattggtcagaaaaagagacattgctgcttctggaagccattatgcat
tatggtgatgactggaagaaggttgcacaacatgttggtggtagaaccgacaaggattgt
gtggctcatttcgttaagcttccttttggggaggaatatctcagacatccattatcaaac
gatgatgaatctggatttgaaactaataaaaggatgtgcctcacgcctctggctgacgca
agcaacccaatcatggctcaggctgcctttttgtcagctttggctggtgtagagattgca
gaagcagctgcccaagcagctgtttctgttctatctcaggtcgacgacgtcacggctagc
agagtggggattgggtctcttgaaagaaactcgaaacgagaatcagaaatttcatctaat
ggtgacaccaaccaaaatgcattggaaagagcagcatatgcagttgcaaattcactactt
gacaaggaagaactagatattgaaagggcaattactgggattacagaagtgcagatgaaa
gagatacaagacaagtttcttcgttttgaggagatggatttgcagactgagaaagagagg
caacaattggagagcatgaagaatctcctttttattgaccagctcaatctttcattttgt
agaaactatacatga
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