Gossypium arboreum (tree cotton): 108450304
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Entry
108450304 CDS
T05776
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108450304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108450304
04121 Ubiquitin system [BR:
gab04121
]
108450304
03029 Mitochondrial biogenesis [BR:
gab03029
]
108450304
Membrane trafficking [BR:
gab04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
108450304
Atg8 conjugation proteins
108450304
Ubiquitin system [BR:
gab04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
108450304
Mitochondrial biogenesis [BR:
gab03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108450304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
rRNA_methylase
Motif
Other DBs
NCBI-GeneID:
108450304
NCBI-ProteinID:
XP_017603355
LinkDB
All DBs
Position
5:13298496..13303608
Genome browser
AA seq
711 aa
AA seq
DB search
MAKEGSGSILQFAPLQSSVDEGFWHRLSSLKLNKFGIDDSPIPISGFYAPCSHPQVSNHL
TLLAESLLSDSNDESTMPSVIRGNRNRCSVPGILYNTNTMEGFHALDKQGLLKAEAMKIW
EDIHSGKAVEDCAVLSRVLLISFADLKKWNFHYWFAFPALALDPPATLVDLRPASQWFTL
EEAESVSTACNEWRNSSLTADVPFFLVSIGSDSHAAVRHLKDLEACQRDGQKLLFAFYDA
CHLPNNPGWPLRNFLALISARWNLKTVRFLCYRENRGFADLNLSLVGEALITVQQGWREQ
QCVPNAVGWELNKGRKVPRCINLAKSMDPTRLAISAADLNLKLMRWRALPSLNLEILFSL
KCLLLGAGTLGCQVARMLMAWGVRRITLLDNGRVAMSNPLRQSLYTLDDCHNGGDFKATA
AVRSLQRIFPAVEAEGIVMAIPMPGHPVSSQEEKSVLEDCKRLNDLIDSHDVIFLLTDTR
ESRWLPTLLCANRNKITITAALGFDSFLVMRHGPGPFNSIPNLKAETEDSLAAGMDNLVL
TNTDGQHRLGCYFCNDVVAPTDSTSNRTLDQQCTVTRPGLAPIASALAVELLVGILHHPN
GIFAEAEIANSSSGGNFELPLGILPHQIRGSLPHFQQMTLLGHSSNSCTACCSTVVSEYR
KRGMQFILQAINHPTYLEDVTGLTELMRSANYFQLDWDDDIEVADDECVEL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaagggagcggatccatacttcaatttgcgccacttcagagttctgttgac
gaaggattttggcaccgattatcttctttgaagctcaacaagtttggtatcgacgattct
cctattcctatctccggtttctatgcaccgtgctcgcatcctcaagtatcgaatcattta
actcttttagcggaatccctgctttctgactcaaatgatgaatcaacaatgccgtctgtt
attcggggtaatcgaaataggtgctccgttcctggcattctttacaatactaatacaatg
gaaggttttcatgctttggataaacaaggcttgctcaaggcagaagcgatgaagatttgg
gaggatattcatagtggaaaagctgtggaggattgtgcagtattatcaagggtccttctt
atctcatttgcggacctcaaaaaatggaactttcattattggtttgctttccctgctctt
gcacttgatcctcctgctaccttggtagatttgaggccagcttctcaatggttcactttg
gaagaggcagagtctgtatcaacagcatgtaatgaatggcggaattcaagtctgacggct
gatgttccattctttttggttagtattggttctgattcacatgctgccgtcaggcatctt
aaggatttggaagcttgtcaacgtgatggtcaaaagttgctatttgcattttatgacgca
tgccatcttccaaacaatcctggctggcctctccgcaacttcttagcacttatttctgcc
agatggaatctgaaaactgttcgctttttgtgctatagagagaatcgaggttttgctgat
ttgaatttgtcacttgttggtgaagccttgattacagttcaacaaggatggagagaacag
cagtgtgtgcccaatgctgtaggatgggaacttaacaaggggagaaaagtaccgaggtgt
attaaccttgctaagtccatggatccaactaggctagccatatctgctgcagacttaaac
ttgaaactaatgagatggcgtgctttgccatctcttaacttagaaatcttgttttctctt
aagtgccttctccttggagcaggtacccttggatgtcaggttgccagaatgcttatggct
tggggtgtccgcagaattacactgcttgataatggaagggtggctatgtctaatccgttg
agacagtctctatacactttggatgactgccataatggtggtgattttaaagccacagca
gcagtgagaagcttacaacgaatatttcctgcagtggaagctgaaggtattgttatggcc
attcctatgcctggacatccagtatccagtcaagaagagaaaagtgtgcttgaagattgt
aaacgactcaatgatttgattgattctcatgatgtaattttcttgttgactgatactaga
gagagtcgatggctccctactcttctctgtgccaacaggaacaagataaccattactgca
gctctaggatttgatagtttcttggttatgcgccatgggcctggtccttttaactccatc
cctaacttgaaagctgaaacggaagactctttagctgctggcatggacaaccttgtccta
acaaatacagatggacaacatagactgggttgttacttctgtaatgatgtggttgcccca
acagattcaacttcaaaccgcacgttggatcagcagtgcactgttacacgtccaggactt
gcacctattgcttctgcactggcagtggagcttttagtgggcattttgcatcaccctaat
gggatatttgctgaagctgagattgccaactccagtagcggtggaaactttgagcttcca
ctgggtattttaccccatcagatacgaggctccctcccccactttcaacagatgaccctt
ttgggccactcctctaacagttgcacagcatgttgtagcactgttgtgtcagaatatcga
aagagaggtatgcaattcatactccaggctattaaccatccaacgtatctggaggatgtt
actggactaacagagttgatgagatcagcgaactattttcaactggactgggacgatgat
attgaggttgcagatgatgaatgcgtcgaactatga
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