Gossypium arboreum (tree cotton): 108450320
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Entry
108450320 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108450320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108450320
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gab03037
]
108450320
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108450320
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
108450320
Chromatin remodeling factors
SRCAP complex
108450320
INO80 complex
108450320
INO80 complex (yeast)
108450320
SWR1 complex
108450320
ASTRA complex
108450320
Cilium and associated proteins [BR:
gab03037
]
Motile cilia and associated proteins
Dynein assembly factors
108450320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_18
AAA_19
Mg_chelatase
bpMoxR
AAA_25
Cdc6_lid
DnaB_C
TsaE
AAA_28
AAA_7
AAA_11
IstB_IS21
nSTAND3
NPHP3_N
Zeta_toxin
Rad17
Motif
Other DBs
NCBI-GeneID:
108450320
NCBI-ProteinID:
XP_017603372
LinkDB
All DBs
Position
5:complement(5872897..5877171)
Genome browser
AA seq
458 aa
AA seq
DB search
MDKMKIEEVQSTAKKQRIATHTHIKGLGLDATGNAIPLAAGFVGQAEAREAAGLVVDMIR
QKKMAGRALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAXLVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMNSPHGIPVDLLDRL
VIIRTQIYGPSEMIQILAIRAQVEELVVDEESLALLGEIGQSTSLRHAVQLLSPASIVAK
MNGRDGICKADLEEVSKLYIDAKSSAKILQEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatgaagatcgaagaggttcaatcaacggctaaaaagcaaagaatcgcgact
cacactcacatcaaaggccttggtctcgatgccactggaaatgcaattcctttagctgca
ggttttgtggggcaagcagaggcaagagaagctgctggtcttgtagtggacatgataagg
cagaagaagatggctggccgtgcacttctgttggctgggcctcctggtactggaaaaaca
gcattggcacttggaatttcccaagagcttgggagcaaggttccgttctgtccaatggtt
ggatctgaagtatactcatcagaagtaaagaaaaccgaggttttgatggaaaacttccga
cgggctattggtctacgtataaaggaaaataaagaggtctatgaaggagaggttactgaa
ctctctcctgaagaaacagagagcgtaacaggtggttatggtaaaagcattagccatgta
attattggattgaaaactgttaaagggacaaaacaactgaagctagaccctacaatttat
gatgccttgattaaggaaaaggtagctgttggagatgttatatatattgaagctaatagt
ggagcagtcaaaagggtgggcagaagtgatgcttttgcgacagagtttgaccttgaagca
gaagagtatgttccacttcccaaaggagaggttcacaaaaagaaggagatagtgcaggat
gtaacactccatgatctggatgctgccaatgcacggccacaaggggggcaggacatattg
tctctaatggggcagatgatgaagcccaggaagactgaaatcactgacaaattacgacaa
gaaataaacaaggtagttaaccggtatattgatgaaggtgttgcatagcttgtaccagga
gttctattcattgatgaggtgcatatgctggacatggagtgcttttcatacttgaatcgt
gctttagagagctcactatctccaatagtaattttcgctacaaatagaggcatttgtaat
gtaaggggaactgatatgaatagtcctcatggcatacctgttgacttattagacagattg
gtgatcatccgtacacagatttacggtccttctgaaatgatacagattttagcaatccgt
gcacaggtggaagaattggtcgtggatgaagagagtctagcactgctaggagagattgga
caaagcacatcattaaggcatgcagttcagttgttatcacctgcaagtatcgtggcaaaa
atgaatggacgggacggcatttgcaaggctgatctagaggaagtaagcaagctatacata
gatgccaagtcttctgcaaaaattcttcaggagcagcaggaaaaatacatttcataa
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