KEGG   Gossypium arboreum (tree cotton): 108450326
Entry
108450326         CDS       T05776                                 
Name
(RefSeq) RNA-binding protein Y14-like
  KO
K12876  RNA-binding protein 8A
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03013  Nucleocytoplasmic transport
gab03015  mRNA surveillance pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108450326
  09122 Translation
   03013 Nucleocytoplasmic transport
    108450326
   03015 mRNA surveillance pathway
    108450326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108450326
   03041 Spliceosome [BR:gab03041]
    108450326
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108450326
Spliceosome [BR:gab03041]
 Complex C
  Other components
   EJC/TREX
    108450326
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 108450326
NCBI-ProteinID: XP_017603378
LinkDB
Position
13:complement(128246503..128249984)
AA seq 200 aa
MASADVEAVDFEPEDDDLMDEDAAAGDASPQVSMPKLKSAITGGASVSLSGPKKTKGRGF
RQDDADRQSHLASRDFDSLGSDGGPGPQRSIEGWIILVTGVHEEAQEDDLHNTFGEFGEI
KNLHLNLDRRTGFVKGYALIEYEKFEEAKNAISAMDGAELLTQTMNVDWAFSNGPSVGAS
KRKNMRAGRTHRSRSPRRRY
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgagtgctgacgtggaggccgtggatttcgagccggaggacgacgacctcatggac
gaggacgccgccgctggtgacgcatcacctcaagtctccatgcctaagctcaagtctgcc
atcactggcggcgcttccgtttctctttctggccctaagaagactaaaggccgtggcttc
cgccaggacgacgccgaccgtcagtcccatctcgcttcccgcgactttgactctctcggc
tctgacggcggccccggtccccagagatctattgaaggatggataattttggtcactggt
gtacatgaggaagcacaagaggatgatttgcacaatacatttggtgaatttggtgagatc
aagaatttgcatttaaatcttgatcgtcgcactggatttgtcaagggatatgcactgatt
gaatatgaaaagtttgaagaagcaaagaatgccatatctgcaatggatggagcagaactt
cttacgcagactatgaatgttgattgggcctttagcaatggacccagtgttggagcctct
aagagaaaaaatatgagagctggacggacacatcgctctcggagtcctaggagaagatac
taa

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