Gossypium arboreum (tree cotton): 108450465
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Entry
108450465 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108450465
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108450465
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108450465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF4
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_Prp19
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Motif
Other DBs
NCBI-GeneID:
108450465
NCBI-ProteinID:
XP_017603594
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Position
11:complement(4545703..4551483)
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AA seq
504 aa
AA seq
DB search
MPQDLPGFYYDAEKNRYFPNKPRIPGSSSFSNVSPSQNNPLSSSLQATTLCPKTRVPASK
LLHLRELNGDAFSYDRGRHSFVEEFHNLHASKPVVWRYGATDENLLRNIRYSALEQTQID
VQTLEGQMETEVLLAGSIDGSLSLLKVGSERHFDYGITHIPDRVWPSTKGDVESDETPPY
VSRPAAAPLHMPSRISSIRLCEKQSFSTNNDDSKFQCSLITTLGSETYGGFVYILNLLEP
VDFTSRLDRRLHAVASFNHTIWTADYSFNTAQAAIGTDIGVALVSVERGATKWVCRSKSD
VLALQFDQTGNIVLCGLRNGAIVTVDVRENQERMFSRLTKLKIPYSSSGRSSQKRWFEIK
GLISPSHTIHMPSSISSLVSLQSYDQYFLASSMDGSMKLYDHRLTKRGAVQSYGGHVNSH
TRIQLGVDQSERFVMSGGEDCYLRLWSIKSGKMLLGEKFSDSVLTNICWRRAQRTLGKEG
EIRQNHNCRAWLASEEGLFHMHWS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagaccttcctgggttctactatgatgcggagaagaacaggtacttccccaat
aaacctcggatacctggctcttcttctttctccaatgtttcgccatcccaaaacaaccct
ctttctagctccctccaggcaaccacgttatgtccaaaaaccagggttcccgcatctaag
ctgcttcatcttagagagttgaacggcgatgcttttagttatgatcgaggaaggcatagc
tttgtggaggaattccataacttacatgcttctaaacctgtggtttggagatatggtgca
acagacgaaaatttattaagaaatatacgttatagtgctttggagcagacacaaattgat
gtccagacactagagggtcaaatggaaacagaagttctgctagcgggcagtatagacggc
tccttgagtctcttaaaggttggaagtgaacgccattttgactatgggatcacacacatt
ccagatcgtgtttggccttccaccaaaggggatgtggagagtgatgaaacgcctccgtat
gtctcgaggcctgcagctgctccactccatatgccgtcaagaatatcttctataagattg
tgtgaaaagcaatctttttctacaaacaatgatgattccaagttccaatgctcactcata
actacactgggatctgagacttacggtggatttgtttatatccttaatctcctggaacca
gtagattttacttctcgattggatcgaaggttacatgcagttgcttcttttaatcatacc
atttggactgcagattatagttttaatacagctcaagcagcaataggaactgatattgga
gtagccttggtcagtgttgaaagaggagcaacgaagtgggtgtgtcgtagcaaaagtgat
gttttggctctacaatttgatcagacaggaaatattgttctttgtggactcagaaatgga
gcaattgtcactgtggatgttcgtgagaaccaggagcgcatgttttctagacttactaag
cttaaaataccttactcgtcttcaggaagaagtagtcagaaaagatggtttgagatcaaa
ggactcatatctccttctcatacaattcatatgccgtcatctatttctagtttggtatca
cttcaatcctatgatcaatacttcttggcaagctcaatggatggttcgatgaagctctat
gatcaccgtctaactaagagaggggctgtacaatcgtatggagggcatgtgaattcgcat
acacgtatacagcttggagttgaccaatctgagagatttgttatgtcagggggagaggac
tgctatttacgactgtggagtatcaagtccggtaaaatgctgcttggggaaaaattttct
gattccgtgctaacaaacatttgctggcgaagagctcaaaggaccttgggaaaggaaggt
gaaattagacaaaaccataattgtagagcatggcttgcatcagaagaagggctattccac
atgcactggtcctga
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