Gossypium arboreum (tree cotton): 108450515
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Entry
108450515 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108450515 isoform X2
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108450515
Enzymes [BR:
gab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
108450515
Ribosome biogenesis [BR:
gab03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
108450515
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Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
LCE6A
30K_MP_C_Ter
Motif
Other DBs
NCBI-GeneID:
108450515
NCBI-ProteinID:
XP_017603670
UniProt:
A0A0B0NXC4
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All DBs
Position
7:complement(105959490..105961505)
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AA seq
439 aa
AA seq
DB search
MAATAIANAKHMMLMMLSASISLPLSSRSTSLSAKRLLYNQYPTRSQTLVRSACTSITTD
TSKKKKKEKGLAKEKRRTRSLRGGDVHILKEEDDDSSSSSTIMMQQSHIPVMLGEVLDVF
SSNLKPLSSFVDCTLGAAGHASAIIQSHPELKLFIGMDVDPLALRMARSRINAAISHSHP
HPNFQALTFVKNFRHIRSLLTQVDHISSGVDGILMDLGMSSMQVNNPARGFSVLANGPLD
MRMDPQASLKAEDILNSWPDSEVGRILRDYGEERNWRLLQNKIAQARLQGGLHSTGELVD
VIRSTTPGTKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLHACFDCLAPEGRLAVISF
HSLEDRIVKQVFLKIIGEEGRDSVRKIKGGEDEKELWIRQTIQGCNGTILTKRPITPSEK
EEGFNRRSRSAKLRVIQKL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggccactgcaattgcaaatgcaaagcacatgatgctgatgatgttgtctgcttcc
atttctcttcctctatcctcacgctctacatcgttatcagcaaagcgtctcctttacaat
caataccccacaagatcgcagaccctcgtaagatccgcttgtactagtatcaccaccgat
acaagcaagaagaagaagaaagaaaaggggctagccaaagaaaagagaagaacccgttcg
ctcaggggtggggatgttcacattttaaaggaggaggacgatgattcttcttcttcttct
acaataatgatgcagcagtcccatatccccgttatgttgggtgaagtgcttgatgtcttc
tcttcaaatttaaagcctctgtcttcttttgtcgattgtactcttggagctgctggtcat
gcttctgcgataatccagtcccaccctgaactcaagcttttcattggaatggatgtggat
ccacttgcactccgtatggctcgttctcgcatcaatgctgctatttcccattctcaccct
catcctaacttccaagctctcacttttgtcaaaaatttcagacacattagatcccttctc
acccaggttgaccacatctcttccggagtcgatggcatcttaatggacttaggaatgtca
tccatgcaggtcaacaatcctgcccgaggcttcagtgtgcttgctaatggaccccttgat
atgcgcatggatcctcaggctagtctgaaagcggaagatatattaaattcttggccagat
agtgaagtgggtagaatcctccgggattatggagaagaaaggaattggcgattgctacaa
aacaagattgctcaagctcgtcttcaaggtggattgcattccactggtgaattggttgat
gttattcggagtaccactcctgggacaaaaggaggtaggcaaggttggataaagactgca
acaagagtgtttcaggctcttagaatcgctgtcaatgatgaactcaagacgctggaggat
tccctgcacgcttgttttgattgtcttgctcctgagggtaggcttgctgtcatttctttc
catagtttagaggacagaattgtgaaacaagtattccttaagatcatcggtgaagaaggg
agggattccgtaaggaagatcaaaggcggggaggatgaaaaggaattatggattagacag
acgatacaaggttgtaatggaacaatacttaccaagaggccaataacaccatctgaaaag
gaagaaggtttcaaccgtcgcagcagaagtgctaagctaagggtaattcagaagttgtag
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