Gossypium arboreum (tree cotton): 108450595
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Entry
108450595 CDS
T05776
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108450595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108450595
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108450595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108450595
NCBI-ProteinID:
XP_017603772
UniProt:
A0ABR0PUW6
LinkDB
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Position
5:complement(7941860..7945022)
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AA seq
256 aa
AA seq
DB search
MAAKPGSAPVTYSPNLGQKTRPPIFKDNDLDWVRPDGRGFHQCRPAFFRTGAVNSASGSA
YAELGSTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFATPVRGQGSDHKEFSSMLLK
ALEGAIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAAVSVSCL
GKNLVIDPVLEEESYQDGSLMLTCMPSRYEVTQLTFTGEWSTPDINEAMQLCLDACSKLG
KVMRTCLKEAASASQE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaagcccggttcagctccggtaacgtattcgccgaatcttggccaaaaaact
cgcccccctattttcaaagacaacgatctcgattgggtccgacctgatggccgtggcttc
caccagtgccgaccagcatttttcaggacaggtgcagtaaattctgcttccggatctgct
tatgcagagcttgggagtaccaaggtcattgtatctgtatttgggccaagagaaagtaag
aaagcaatgatgtacagtgatactgggagattaaattgtaatgtcagctatacaacattt
gccactccagttcgaggacagggatcggatcacaaagagttttcgtcaatgcttcttaaa
gctttggaaggtgcaataatgttggaaacattccccaagaccaccgtggatgtttttgca
ttggtgttggaatctgggggcagtgatcttcctgtggtgatatcatgtgctagtcttgcc
cttgcagatgcggggatcatgatgtatgaccttgttgctgcagtttctgtgtcctgtcta
gggaaaaaccttgtgattgatcctgttctcgaagaggaaagctaccaagatggaagctta
atgcttacatgtatgccttctcgttatgaggtcactcaactaacatttacaggagaatgg
tcaaccccagatattaatgaggcaatgcagctttgccttgatgcttgcagtaagcttggt
aaagtgatgaggacatgcttgaaggaagccgcgtctgcctcacaagagtag
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