Gossypium arboreum (tree cotton): 108450620
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Entry
108450620 CDS
T05776
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108450620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108450620
03036 Chromosome and associated proteins [BR:
gab03036
]
108450620
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108450620
Coactivators
SAGA/TFTC/STAGA complex
108450620
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108450620
STAGA complex
108450620
TFTC complex
108450620
SAGA complex
108450620
SLIK complex
108450620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
108450620
NCBI-ProteinID:
XP_017603816
LinkDB
All DBs
Position
5:91920684..91924327
Genome browser
AA seq
526 aa
AA seq
DB search
MSNVPKEAIEVIAQSIGITNLSPDVALALAPDVEYRVREIMQEAIKCMRHSRRTVLTTDD
VDSALNLRNVEPICGFASRDALRFKKAAGHKDLFYIDDKDVEFKEVLESPLPKAPLDTSV
TSHWLAIEGIQPAIPENASIEAPSDGKKAEYKEDGLSVDVKLPIKHVLSRELQLYFDKIV
DITMNKSVSILFKQALLSLATDSGLHPLVPYFTCFIADEVARNLNNFPLMFALMRVARSL
LQNEHLHIEPYLHQLMPSIITCLVAKRLGNKFTENHWELRNFAAKLVASICKRFGHVYHN
LQPRVTRTLLHAFLDPTKTFPQHYGAIQGLAALGPSVVRLLILPNLEAYLQLLEPEIKRH
EAWCVYGALLRAAGLCMYDRLKMFPSLLAPPTRPVWKSNNKVATNKRKASTDTLMQQQPP
AKKIATESAIGMMPINSMQTDLQGAVSGFSSTVGGSNIGVSSMSRPLSNDNMLGREVGGR
VSKTSTVLAQAWKEDTDPGNLLASLFELFGESMLSFTPKPELSFFL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgttccaaaagaagccattgaagtgatagcacagagcattggcattaccaat
ttgtccccagatgtcgcccttgctttggctcctgatgttgaatatcgggttcgagaaatc
atgcaggaggcaattaaatgcatgcgccactcacggcggacggttctgacaactgatgac
gttgacagtgctcttaatctgagaaacgtggagccgatatgtggatttgcctctcgtgat
gcactacgattcaagaaagccgctgggcataaggatttgttctacattgatgacaaagat
gtggagtttaaagaagttcttgagtcacctttgccaaaagcaccacttgatacatctgtt
acatcccactggcttgcgattgaaggcattcaaccagcaattccagaaaatgcttcaatt
gaagcaccctctgatggtaaaaaggctgaatacaaagaagatgggctttccgttgatgtc
aaattacctattaagcatgtattatctagagaacttcaactttactttgacaagatcgtg
gacattaccatgaataaatcagtctcgattctctttaaacaagcattactgagcttggca
acagactcgggattacatcctttagttccttattttacatgtttcattgctgatgaggtt
gcacggaatttgaacaatttccctctcatgtttgctttgatgcgtgttgcccggagtctt
ctccagaatgaacacttgcacatagaaccttacttacaccagttgatgccatctattatt
acatgcctcgttgcaaaaaggttaggaaataaattcaccgaaaatcattgggaacttaga
aactttgcagcaaagctagtggcatcaatttgcaaaagatttgggcatgtttatcacaat
cttcagccacgtgtgacaaggacactgctccacgcttttttggacccaacgaaaacattt
ccccagcattacggagcaattcaagggttagcagcccttggacccagtgtggttcgttta
cttatactaccaaatcttgaagcgtatttgcagcttcttgaacctgaaataaaaagacac
gaggcctggtgtgtttatggggctctgctgcgtgcagctggactgtgcatgtatgatcgg
cttaaaatgttccccagtttgctagcacccccaactcgtcccgtctggaaaagcaacaac
aaagttgcgactaataaacgaaaagcaagcacagacaccttgatgcagcagcaaccacct
gccaagaaaatagcaactgagagtgcaataggtatgatgccaataaattccatgcaaact
gatttacaaggggcagttagcggcttttctagcaccgtaggaggttccaatattggtgta
tcatcaatgtcacggccgttatcaaacgataacatgctaggaagggaggtcgggggtcga
gtttcaaagacatcaactgttctagctcaggcctggaaggaagacacagacccagggaac
ttgttagcatcattatttgaactttttggtgagagtatgttatcatttacccccaaacct
gagctttcattcttcctttga
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