Gossypium arboreum (tree cotton): 108450813
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Entry
108450813 CDS
T05776
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108450813
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gab04812
]
108450813
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108450813
Cytoskeleton proteins [BR:
gab04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
108450813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
Cnd1
Adaptin_N
INTS1_R4
PDS5
HEAT_Maestro
MMS19_C
UTP20
Tti2
TPR_TTI1_C
V-ATPase_H_N
DUF1908
Motif
Other DBs
NCBI-GeneID:
108450813
NCBI-ProteinID:
XP_017604079
LinkDB
All DBs
Position
7:complement(61321120..61333393)
Genome browser
AA seq
1409 aa
AA seq
DB search
MEEALELARAKDTKERMAAVERLYHLLEGSRKSLTSSEVTSLVDCCMDLLNDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYGWTHRSWRVREEFARTVTSAINLFASPELPLQRAILPPILQMLHDSNPGVREAAI
LCIEEMYMQAGTQFRDELHRHQLPASMVRDINARLEKTEMQVRPSNGMLGGLAAGDRKPV
VYNVKKSSPQAKSSSREISLLGGEIDVTEKSIDPIKVYSDKELIREFEKIASTLMPEKDW
SIRIAAMQRVEGLVSGGAADYPCFRGLLKQLVGPLSAQLSDRRSSIVKQACHLLCFLSKE
FLGEFESCAEMFIPVLFKLVVITVLVIAESADNCIKMMLHNCKVACVLPRIADCAKNDRN
AVLRARCCEYALLILEHWPDAPEIQRSADLYEDLIRCCVADAISGVRSTARMCYRMFTKT
WPDRSLRLFYSFDPAIQRIINEEDGGMHRRHASPSVRDRNVKMSFTSQTSATLNVPGYGT
SAIVAMDRTSSLSSGTSLSSGLNFCQPKPAGKGAERTLESVLHASKQKVSAIESMLRGLD
ISEKQRQTSLALGVDPPSFHDPPFPAAVSASNSLTSSLGLESITSTVGKSGNHNGGLIMS
DIITQSSKDSGKLSYRSNVAIESFPVLSSYSPRRAAVRPDRGSIEDNSDIREGSRFIKPH
IDRQYFDMPYRDVNSRHSQNNNIPNFQRPLSRKHVSGRISAERRKSFDDNQPSLGEMSNY
VDGPASLTEALSEGLSPSSDWCARVAAFMYLRSLLQQGPKGVPEVNQNFMKVMKLFFQHL
DDPHHKVAQAALSTLADIIPSCRRPFESYMERILPHVFSRLIDPKESVRQPCSTTLGIVS
KTYSIDSLLPALLRSLDEQRSPKAKLAVIEFSISSFNKHATNSEGSSNIGILMLWLAKLK
PLVHDKNTKLKDVAIACIISVYSHFDPIAVLNFILSLSVEEQNSLRRALKQYTPRIEVDL
ISYLQNKKERQRPKSSYDPYDAVGTWSEEGYVGVSTQDSTLITGPIGQETSDETQVNLFQ
NFGISSNADVLPSKTKELSYMVNSNDQNLGYQMGQVENLESSVNMEGLSTPHLETNGPSR
FDSLVDVKGVACDHEISSELDLNHLKPAPVKISSMPDTGPSIPKTLHLFCNGIDESSTAS
KRGALQQLIEISVANDISIWIKHFNQILTTLLEVLDDSDSSIRELALSLIVEMLKNQKDA
MEDSVEIVIEKLLHVTKDVVPKVSNEAENCLNTVMSQYDPFRCLSVIVPLLVTEDEKTLV
ICINCLTKLVGQLSQEDLMSLLPSFLPAIFEAFGNQNADVRKTVVFCLVDIYIMLGKAFL
PHLEGLNSTQLRLVTIYANRISQARLGSL
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcactagagctggcacgcgccaaagacaccaaggagcggatggcggctgtg
gaacgtctctaccacctcctcgaaggttccagaaagagtctgacttcttcggaggttact
tcgctcgtggattgctgcatggatctcctcaacgacaacaacttcagagtctcccagggc
gctctccaggctcttgcttctgccgccgtcctctctggtgatcacttgaagttgcacttc
aacgcgcttgttcccgcggttgttgaacggttaggtgacgctaagcaacccgtcagagac
gctgcgagacgcctacttctcactctcatggaggtttcttctccaacaattattgttgaa
agggcgggctcttacggctggacgcatagaagttggagagttagggaggaatttgcccgg
acagtcacatccgcaatcaatctttttgcatctcctgagcttccacttcaacgggctatt
ctcccccctattttgcagatgttgcatgactcaaatcccggtgttcgtgaagctgctata
ttatgcattgaggaaatgtatatgcaggctggaactcaatttcgtgatgaacttcatcgc
catcagcttcctgcatctatggtgagagatattaatgccagactagagaaaactgagatg
caagttcgaccttcaaatggaatgttgggtggtcttgctgctggagatagaaagcctgta
gtctataatgtcaagaaaagcagtccacaagccaagagttcttcaagggagatatctctt
ttgggaggtgaaattgatgtcacagaaaaatccatagatccaattaaagtttactcagat
aaggagctgataagggaatttgagaaaattgcttctactcttatgccagaaaaagattgg
tccattcgcattgctgcaatgcagagagttgaaggccttgtttctggtggtgctgctgat
tatccatgtttccggggacttttgaagcagcttgttggcccactaagtgcacagttatca
gatagaaggtcaagcattgtgaagcaggcttgccatttattgtgcttcttatcaaaggag
ttcttgggagaattcgagtcatgtgctgagatgttcatcccagtccttttcaagttggtt
gtgattactgtgcttgtaattgcagagtctgcagataattgcataaaaatgatgttgcat
aactgcaaagttgcctgcgtgcttccccgcatagctgattgtgcaaagaatgaccgtaat
gctgtactccgtgccaggtgctgtgaatatgcactgttgatacttgaacattggccagat
gcaccagaaatacagcgatcagctgatttatatgaggatttgattaggtgttgtgttgct
gatgccattagtggggtacgatcaactgctagaatgtgctacagaatgttcaccaaaact
tggccagatcgttctcttcgcttgttctactcctttgatcctgccattcaaaggataatt
aatgaagaagatggagggatgcataggcggcatgcttctccatctgtccgtgacagaaat
gtaaagatgtcatttacctctcaaacttctgctactttaaatgtacctggatatggaaca
tctgctatagttgcgatggacagaacttcaagcttatcctcagggacatctctctcttct
gggttgaatttctgccaaccaaagcccgcaggtaaaggtgctgagcgtactctggagagt
gtattgcatgcaagcaaacagaaagttagtgctattgaaagtatgcttagaggtctggac
atatctgaaaaacagaggcagacaagtttggctctaggagttgaccctccatcattccat
gatccaccattccctgctgctgtttcagcttctaatagtctcacaagctctttaggacta
gaatcaatcacctctactgttggtaaaagtggtaaccacaatggtggtctgattatgtct
gatatcatcactcaaagttccaaagattcaggcaagttgtcatatagaagtaatgtggca
attgagtcttttccagttttatcatcatactctcccaggagggcagcagtaaggccagac
cgaggttccattgaagataacagtgacatcagagagggcagtcggtttataaaaccacat
attgacaggcaatattttgacatgccctatagagatgtaaactccaggcattcacagaac
aataatattccaaacttccagaggccactttcaagaaagcatgtatctgggcggatctct
gctgaaaggagaaagagttttgatgataaccaaccgtcacttggtgagatgtcaaattat
gttgatggtccagcttctcttaccgaagccctaagtgaggggcttagtcctagttctgat
tggtgtgccagagttgctgcttttatgtatctccggtctttgttgcagcagggtccaaaa
ggtgttccggaagtgaatcaaaatttcatgaaggtaatgaaattgtttttccagcacttg
gatgaccctcaccacaaagtcgcacaggctgctctttcaacacttgctgatattattcca
tcatgccgaaggccctttgagagttacatggaaaggatcttaccccatgttttctcgcgg
ttaattgatccaaaggagtcggttaggcaaccttgctccacaacattgggaattgttagc
aaaacttatagcatagattctcttttacctgctttgctacgttctcttgatgaacagcga
tcaccaaaggcaaagctagctgttattgagttttccattagttccttcaacaagcatgct
acgaattctgaaggttctagtaatattggcatcctgatgttatggcttgctaaattgaaa
cctttggtccatgataaaaataccaagcttaaggatgtggctattgcttgcattatatct
gtatattcacattttgatccgattgctgttctaaattttattcttagtttatcagttgaa
gaacaaaattccttgagacgggcacttaaacagtacacacctcgtattgaggtggacctg
ataagctatttgcagaacaagaaagagagacagcggcctaagtcatcctatgatccatat
gatgctgttggaacatggtctgaagaaggatatgttggggtgtccactcaagattcaacc
ctgatcactggccctattggccaggaaacatctgatgaaactcaggttaacttatttcag
aactttgggatcagttcaaatgcagatgttcttccttccaaaaccaaagaattgtcttat
atggttaattctaatgatcagaacttgggatatcaaatgggacaagtagagaacttggaa
agtagtgttaacatggaaggtctatctactccacatctggaaactaacggtccgagtaga
tttgattctttggtggacgttaaaggggttgcctgtgatcatgagatttcatcagagctg
gatcttaatcatctcaaacctgcacctgtaaagattagctctatgccagatacaggacct
agcattcctaaaactcttcacctgttctgcaatgggattgatgagagctctacagccagt
aagcgtggtgcacttcagcaattaattgaaatttctgtggctaatgatatctctatttgg
atcaagcacttcaatcagattttgactactctacttgaagttttagatgattccgattcc
tctatccgagaacttgccctgtcattgatagttgaaatgcttaaaaaccagaaagatgct
atggaagattctgttgaaatagtaattgagaagctgcttcatgtaacaaaggatgttgtt
cccaaagtttcaaatgaagctgagaactgcttgaatactgttatgtctcagtatgatcca
ttcagatgtttaagtgttattgtacctttattagttactgaagatgagaagactctagtt
atttgcataaactgtttaacaaagcttgtgggccagctatcacaggaggatctaatgtct
ctattgccttcatttttgcctgctatttttgaagcttttggaaaccagaatgcagatgtc
cgtaagactgtggtattctgtttggtcgatatttatataatgcttgggaaagcatttttg
ccacacttggaagggcttaacagcacacagctgcgactggttacaatttatgctaatcgg
atctcacaggccagattgggatccctatag
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integrated database retrieval system
