Gossypium arboreum (tree cotton): 108450899
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Entry
108450899 CDS
T05776
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108450899
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108450899
Meiosis-specific proteins
Cohesin complex and associated proteins
108450899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_29
AAA_21
AAA_23
ABC_tran
Fez1
SbcC_Walker_B
Laminin_II
Motif
Other DBs
NCBI-GeneID:
108450899
NCBI-ProteinID:
XP_052886375
LinkDB
All DBs
Position
7:3303297..3313980
Genome browser
AA seq
1217 aa
AA seq
DB search
MPSLTSPGKILRLELENFKSYKGLQTIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGGQLRDLIYAFDDREKEQRGRRAFVRLVYQLAGGSELCFTRSITSTGGSEYRIDSSV
VNVEEYNGKLRSLGILVKARNFLVFQGDVESIASKNPKELTGLLEQISGSESVKNKYEEL
EELKARAEEKSALIYQRKRTIVMERKQKKEQKEEAEKHFRLQDELKSLKKEHYLWQLHNI
EKDIDKITDELDSEKKNREDVMHELEHFEAEAAKKKKEQAKYLKEIAQCEKRISERSIRV
DKSQPELLKLNEEMSRINSKIKSNRKELERKKEERRKHGDDIKELQKGIQDLTAKLEELN
EKSRDGTGKLPLLDSQLTEYFQIKEDAGMKTAKLRDEKELLDRQQHTDIEAQKNLEENLQ
QLRNREQELEAQEDQMRTRLKKILDTSAKQKDELAELKKELREMQDRHQKSRSKHENLKS
KIAEIENQLRELKADRHENERDARLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTV
AMGRFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSVRVKPIIERLRTLGGTAKLIF
DVIQFDPALEKAVLFAVGNTLVCDDLEEAKVLSWTGERFKVVTVDGILLSKSGTMTGGTS
GGMEARSNKWDDKKIEGLKKKKEQFESELEELGSIREMQLKESETSGRISGLEKKIQYAD
IEKKSIEDKLKNLKQEKKNIKDRIGHITPEIQKLKDVSDKRSKDIMKLEKRINEIVDRLF
KSFSQSVGVANIREYEENQLKAAQNMAEERLSLSNQLAKLKYQLEYERKRDVDSRIKKLE
SSISSLENDLKLVHKKEAEVKLATEKASEDINRWKEEVKEWKSKSEDCEKEIQEWKKQAS
AATTSISKLNRQINSKETQINQLDEWKGEIIEKCDLEHIELPLIADPMETESSNGKEFDF
SQLNRSLLQDRRPSDREKLEAEFKQKIDALVSEIERTAPNLKALDQYKTLQEKERDVTEE
FELARKEEKQVADEYNSVKQKRYELFMDAFNHISSNIDRIYKQLTKSGTHPLGGTAYLNL
ENEDDPFLQGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDA
ALDNLNVAKVAGFIRSKSCDGARTSQDSEIGSGFQSIVISLKDSFYDKAEALVGVYRDSE
RSCSRTLTFDLTKYRES
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctttgacttctccaggaaaaatacttcgcctagagcttgagaacttcaagtcc
tacaagggtcttcaaactatcggtcccttctccgacttcaccgccattattggaccgaat
ggggcaggcaagtccaatctcatggatgcaatcagcttcgttcttggagtccgaactggt
cagctacgtgggggccaactcagagacctaatatatgctttcgacgaccgtgaaaaggaa
caacgtggccgacgcgcatttgtgcgattagtttaccagcttgccggtggctccgaactc
tgtttcactcgttccatcactagtactggaggtagcgagtaccgtatcgacagcagtgtt
gtcaacgtggaggagtacaatggaaagttaagatcacttggtattctcgttaaggcccgg
aattttcttgtttttcagggtgatgtcgagtccattgcttcaaaaaatcccaaagaactg
acagggctgctcgagcagatttcgggctctgaatcagtaaagaacaaatatgaggagttg
gaagagctaaaagctagggctgaagaaaaatcagcgcttatttatcaaagaaagaggaca
atagtgatggagagaaagcaaaagaaagaacagaaggaagaagctgaaaagcacttccgc
ttgcaagatgagctgaaatctttgaaaaaggagcattatttgtggcaattgcataacata
gagaaggacattgacaagattactgatgaactcgactctgaaaaaaagaaccgtgaagat
gtgatgcatgagctagaacattttgaagctgaagcagctaaaaagaagaaggaacaggct
aaatacctaaaggagattgctcaatgtgaaaaaaggatctccgagagaagcattagagtt
gataaaagtcaacctgagcttctgaaattaaatgaagaaatgtctcgtataaattcaaaa
atcaagagtaatcgaaaggagcttgaaagaaaaaaagaagaaaggaggaaacatggtgat
gatataaaagaattacagaaaggcatacaggatctgactgcaaagttggaagagttaaat
gaaaaaagccgcgatggcacagggaaactccctttgcttgatagtcaacttaccgagtat
ttccaaattaaggaggatgctgggatgaaaactgctaagttaagagatgagaaggagctt
ctcgataggcaacaacatactgatattgaagctcaaaaaaatttggaagaaaatctccaa
cagttgagaaatagggagcaagagttggaagcacaggaagaccaaatgcgaactagactg
aagaagattcttgatacctctgctaaacagaaggacgaacttgcagaattaaaaaaggaa
ctacgagaaatgcaagatagacatcagaagtccagatctaagcatgagaacctcaagtcc
aaaattgctgaaatagaaaatcagttacgtgagctgaaggctgatcgacatgaaaatgaa
agggatgctaggttgtctcaagctgttgagactctgaaacgcctgtttcaaggtgttcat
ggtcgcatgactgatctttgtagaccaacacagaagaagtacaaccttgcagtcactgtt
gccatgggcagatttatggatgctgttgttgtagaggatgaaaataccggaaaggaatgt
attaagtatttgaaagagcaaaggcttcctcctcagactttcattcctcttcaatcagtg
cgtgttaagcctatcattgaaaggttgcgcaccttaggtggcacagcgaagcttatcttt
gatgtgatccaatttgaccctgctttggagaaggcagttctttttgctgttgggaatact
ctagtttgtgatgatcttgaagaagccaaggttcttagctggactggagagaggtttaaa
gttgtaactgttgatgggattctactctcaaagtccggcacaatgactggtggtacaagt
ggtggaatggaagctaggtcgaataaatgggatgataagaaaattgaaggtttgaaaaaa
aagaaggaacaatttgaatcagagctggaagagcttggatcaattagagagatgcagcta
aaggagtctgaaacatctgggagaattagtggacttgaaaagaaaatccaatatgctgac
attgagaagaaaagcatagaagacaagcttaaaaacttgaagcaggagaagaagaatatt
aaggataggattggacatataactcctgagattcaaaagttaaaagatgtgagtgataaa
aggagcaaagacatcatgaagttggagaagaggattaatgaaattgttgatcgacttttc
aaaagttttagtcagtctgtaggggtggcaaacatccgtgagtatgaagaaaatcagctc
aaggctgcccagaatatggcagaagagaggcttagcttgagtaatcaacttgcaaagttg
aagtatcagttggagtatgagcgtaaacgagatgtagattcaagaattaagaagctggaa
tcttctatcagttccttggaaaatgatttaaaactggttcacaaaaaagaggctgaagtc
aagttggcaacagaaaaggcttctgaagatatcaatcggtggaaggaagaagtgaaggag
tggaaatccaagtcagaagactgtgagaaggaaattcaggaatggaagaagcaggcttct
gctgctacgacatccatatccaaacttaatcgccaaataaattctaaggagactcagatt
aatcaactggatgaatggaagggggaaatcattgaaaagtgtgacttagagcacattgag
cttcctctcattgcagacccaatggaaactgaatcttcaaatgggaaggagtttgatttt
agtcagttaaatcgatcacttctgcaggatcgaaggccttctgatagggagaagcttgag
gcagaattcaaacaaaaaattgatgctctagtgtcggaaattgaaagaactgctcccaat
ttgaaggctcttgaccaatataagactcttcaagaaaaggaaagagatgtaactgaagag
tttgaattagccagaaaagaggagaagcaagtagctgatgaatacaattcagttaagcag
aagagatatgagttgttcatggatgctttcaaccacatttctagtaatatcgataggatt
tacaaacagctaacaaagagtggtacgcatccattgggtgggacagcatatttgaactta
gaaaatgaggatgatccttttctacaaggtatcaaatacacagctatgccgccaacaaag
cgcttcagggatatggaacaactatctggtggagaaaaaacagttgcagcacttgctcta
ctcttctccatccacagctacaagccttcaccctttttcatattggatgaagtggatgct
gcattggataatctaaacgttgcaaaggtagctggattcatccgttcaaaatcatgtgat
ggagcaaggactagccaggacagtgaaattggaagcggtttccaaagtatagtgatatca
cttaaagatagcttttatgacaaggccgaggctttggttggagtttatcgggattcagag
aggagctgctcgagaactttaacgtttgacttgaccaaataccgagagtcatga
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