Gossypium arboreum (tree cotton): 108450940
Help
Entry
108450940 CDS
T05776
Name
(RefSeq) neutral ceramidase 2-like isoform X1
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00600
Sphingolipid metabolism
gab01100
Metabolic pathways
Module
gab_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108450940
Enzymes [BR:
gab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
108450940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Toxin_18
Motif
Other DBs
NCBI-GeneID:
108450940
NCBI-ProteinID:
XP_052883895
LinkDB
All DBs
Position
5:15680926..15685627
Genome browser
AA seq
798 aa
AA seq
DB search
MLDGLSSEEHTDKMHKHQHLLPIFVSLCAAFALIDEVDGEYLIGVGSYDMTGPAAGVNMM
GYANIDQNTAGIHFRLRARTFIVAESSQGARFAFVNLDAGMASQLVTIKVLQRLKTRLGD
LYTQENLAISGTHTHAGPAGYLQYVVYSVTSLGFINQTFDAIVTAIEQSIIQAHNNLKPG
SIFLNTGDVENAGINRSPSAYLFNPPEERARYTTNVDTTMTLLKLLDSASNRSIGAFSWF
ATHGTSMSRENRLISGDNKGAAARFLEDWFTFSNNSLSTRNTKFSTIQSKHISDCPHYFC
LNSDNDKKREHSMHCVIDIKDISTLRNKAQKIKATGGKPCGKTTSQGFKVRKNDGSSFVG
AFCQSNVGDVTPNVLGAFCTDTGKPCDFNHSSCNGNDQLCVGRGPGYPNEILSTKIIGER
QFEKAVELFSSATNPLSGKIDYRHAYINFTSIEVQLNESTVVKTCPAAVGAGFAAGTTDG
PGVFGFQQGDTEINEMWKRLRDLLKEPSQYQVDCQKPKPVLLSTGEMFVPYAWAPAILPI
QILRLGNFVILSVPGEFTTMAGRRLREAVKETLINNGNGEFDNETHVVIAGLTNTYSQYI
ATFEEYKQQRYEAASTLYGPHTLSAYIQEFKKLAKAMATGEQLGGTGLSPPDLSSVQLSL
LQDPLGDSPPPGKRFGDMQQDVAQPKGGSFKKGDKPSATFCSANPRYDLLIEGTFAVVEM
LQGERWVPVYDDDDFCLYFKWNVTVDNGSLYGLATIEWEVPEDATSGVYRLRHFGSSKKT
KDYPNEYFTGASSAFTVS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatggattatctagtgaggaacacactgacaaaatgcataaacaccagcatttg
ttaccgatttttgtttctctttgtgcagcttttgccttgatagatgaagttgatggcgag
tatttgattggagtcgggagctacgatatgacgggtcctgccgctggggttaacatgatg
ggctatgctaacatagatcagaatacggccggaatccatttccgactacgagcaagaact
ttcattgttgctgaaagttctcaaggtgcaaggtttgcttttgttaatcttgatgcaggc
atggcatcgcagcttgtcactataaaagtgcttcagagactcaaaacaaggttaggagat
ttgtatacacaagaaaatttggcgatcagtggcacgcatacacatgctgggcctgctggt
tacttgcagtacgtggtttactctgttacttcactagggtttatcaaccaaacgttcgat
gcgattgtcacggcgatcgagcaaagcattattcaggctcacaacaacctaaaacctggc
tcaatcttcctgaacaccggggatgtggaaaatgcgggaataaataggagcccaagtgcg
tacctgttcaaccctccagaagaaagggctagatacaccaccaacgttgatacaacaatg
accctgttgaagcttttggatagtgcaagcaataggagcataggtgcattctcctggttt
gccacgcatggaacgtccatgagccgagaaaacaggctcatcagtggagacaacaagggc
gccgctgccaggtttttggaagactggttcacttttagcaacaattccctctctactcga
aacaccaagttttctaccattcaaagtaagcatatctccgattgccctcattatttttgt
ttaaattcagataacgataaaaaaagagaacattccatgcactgtgtgatagacatcaaa
gacatcagcacactaagaaacaaagctcaaaagattaaggccacgggaggaaaaccctgt
gggaaaacaaccagccaaggcttcaaggtgaggaaaaacgatgggtccagctttgtgggg
gctttctgccaatcaaatgttggagatgtgaccccaaatgtgctaggagcattttgcaca
gacacgggcaagccttgtgatttcaatcactcgtcttgtaatggcaatgaccagctttgc
gtggggcgtggcccaggatacccaaatgaaatattgagcacaaagatcataggagagagg
caattcgaaaaggccgtggagctattcagttctgctactaatcctttgagtggaaaaatt
gattaccgccacgcgtatataaatttcactagcattgaagtgcaattgaatgaaagtacc
gtggtaaagacttgtccagcagctgttggcgcgggttttgctgctggaactacagatggg
cccggagtgttcggttttcaacaaggagacaccgagataaacgagatgtggaaacgatta
agggacttgttgaaagagcctagccagtatcaggtagattgccaaaaacccaagcccgtt
ttgcttagcactggcgaaatgtttgtcccctatgcttgggcgcccgctatactcccaatt
caaattctgcggttggggaattttgttatcttatctgtgcctggagagttcacgacaatg
gctggtcggcggctgagggaagcagttaaagagacattgataaataatgggaatggagaa
tttgataacgagacacatgttgtaatagcagggctcacaaacacttattctcagtatata
gcaacttttgaggagtacaagcagcagcgatacgaggctgcttcaacactatatggtcct
catacattatcagcttacatccaagagtttaagaaacttgcaaaagcaatggctacagga
gaacaactcggtggaaccggcttgtcaccgccggatctttcctctgttcaactcagcctc
ttacaagatcctctaggagactcaccgccccctggcaaaagatttggagacatgcagcaa
gatgttgctcaaccaaaaggcggatcattcaagaagggagataaaccgagtgctacgttt
tgcagcgctaatccaaggtatgacctgctgatagaaggcacatttgcagtagtagagatg
cttcaaggcgagaggtgggttccagtgtacgacgatgacgatttttgcttgtatttcaag
tggaatgtaacagttgataacggtagtttgtatggtctggcaaccattgaatgggaagtg
ccagaggatgctacttccggggtttatcggctcaggcactttggatcgtctaagaaaacg
aaggactatccaaatgagtactttacaggcgcatccagtgcattcacggtgtcatga
DBGET
integrated database retrieval system
