Gossypium arboreum (tree cotton): 108451083
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Entry
108451083 CDS
T05776
Name
(RefSeq) uncharacterized protein At3g06530 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108451083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108451083
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108451083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
108451083
NCBI-ProteinID:
XP_017604320
LinkDB
All DBs
Position
7:100518028..100534017
Genome browser
AA seq
2171 aa
AA seq
DB search
MASSIASQLQAIKTFIQVENEPQKRPLTRPSILFNPKEAADIDIDTILDIALSGLEILVG
VDERFRNCKIDLFNLKSKELDRELMGVDENNQINASISSYLRLLSGHLQLSASLKTLEYL
IRRYKIHVYNVEDLVLCVLPYHDTHAFVRIVQLINTGNSKWKFLDGVKASGAPPPRSVIV
QQCIRDMGVLEALCNYASLTKKFQASRPVVSFCTAVIVEVLGCVATIDSDIVKRIHPFVA
SGLQFGAKGGSDHKAGALMIVGFLANKVALAPKLVNSLIRTVAEVAREDVKESTDLQWFR
LALMALINLVQSQSVDVFPKKALESLRDIKDIGAVLLELSKEFNIDRFLAILLEALVDQS
SYDDSYHLALISVIDSVPLRNLVDPIVSKILLTCMKLSEREGKLVSSESVTWAKNVLATI
NKNYPSQFHGAVHKFLEDAKVQSKKEDTVCEFLSKILDGNLDLSIAFSESKIWFASHHPK
PEVRRATFSGLNRSAILKMNSLDAQRLVAIKDAVLRQLHDDDLTVVQAALSVDGLTEVVS
PSDLLEALRDVLKKCLSFLTLGSSVNSTLSCDVPVSFLKIAMLSFHDQIDYLKEVASMIF
SLLLILPETHRLSLKVLDLAKTIKWPFFQTLAAASGEEVLQKLLSGSSVDAEAVGRFEKK
MQKRGTVSTVNMEIVRSLSEEFLMQPTEYMPWLTRSCDNFKSSKTLLFLVLMQSFSMLIN
NGKFLVLFDACFPVLKSQWEAFGSTLGNSLHEFNEEMLDWDCKKFLDQLFVADVDTVNKN
ILICLFWTLLDSAVNAEFFLDDNENGITRVQDFFIFVAGSSLKDAFKKHLQELVEKHLHG
FLTKCKVSPVRFLSRFYTAEEVPAAVQVESLHCFSFLCSQLNDRLPFELLAEFPSLLLPL
TSDNQATRIAAMDCIEKLYKLWCQVDFSSKKNGNTAIWSHFLDELLGLMVQQKRLILSDK
NFLPSFLTCLLGSSCESILVSPNIEQRFNKSTKEKILAFILSSALNLSESGKLKVLSLLK
GLGNAILHVKEIEALLSLLLRKRSQCYFELENSSLKLSETEIMILCLLLEMCIMPSSLGG
QFSEHVFKALQLDSKSPEDPAIKEPCITVLQKLNSQFYSGLTNEAQGQIFRQLVLLFRNS
NSDIHSATRDALLRLTIASSTVGEMLDLVCKEDPVAIVSADGKKKKKSAANPKPGYDLVF
KGEQTLYFLSSLLDVLLLKKDISNRQFLVGPLFKLIRKAFSDEWVHGVLAQDGSWIQTSG
VPQSKSTVIVDVQKILLLILDDIFASFMDESSSLKDGIMDKIDIKLLVDCARLTKDGVTR
NHVFTLLSTIAKLVPNRILEHILDILMVIGESAVSQIDSHSQHVFEDLISAVVPCWLSKA
NNTENLLQIFVNILPEIADHRRLSIVAFLLRILGEIDSLSSLFVLLFRSLVSRKGLSCLT
DTYSSDSFLYSAHQDWEYAFAIQICGQYSCRVWLPSILKVLQVMRPNDLTQEVFMQFFFA
MHFVLYKLQDPEFVLKLESRENSDSIQRKLGELVEQVVFLSQVVDARRKQIGIPVGSWKE
FKACVHAILKTITMSMMPSTCFEYITKLLGNADNTVRKKALEILCETLKDHVSVKSKCKE
KRDLDPNSNSYELHLDDTALEYFQKMCTEIVQIVDDSIDESNVSLKLAALSTLDILAQRF
SSNHSVFGMCLASVTKGISSDNMAVSSSCLKTTGTLVNVLGPKALAELPCMMENVIRKSR
GISESSNLESRSDESTSILLSILITLEAVVEKLGGFLNPYLGDIIELMVLHPAYVSASDL
KLKTRADLVRKLLTDKIPVRLTFQPLLKIYSGAVKSGDSSLVIAFQMLADLVSKMDRTSV
SGSYGKIFDQCMVALDLRRQHPVTVQTIDAVEKSVINAIISLTMKLTENMFKPLFAKSIE
WAETEFQDVAGSGTMNIDRAISFYSLVNKLVENHRSLFVPYFKYLVKSCVQLLSDSADKA
SDLVRKKKKPKVQEDGNIVNGGVSLKSWHLRALILSSLHKCFLHDTGRQKFLNSSNFQVL
LKPIVSQLVIEPPTSVEEQTDVPSLKEVDDLLVVCIGQMAITAGTDLLWKPLNHEVLMQT
RSEKMRARVLGLRIVREFLEKLKEEYLVLLPETIPFLGELLEDVELPVKSLAQDILKEME
TMSGENLREYL
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttctatagcttctcagctacaggctatcaaaacgtttattcaagttgagaat
gaacctcaaaagcgtcctttaactcgcccttccattttgtttaaccccaaagaagctgct
gatattgatattgatactattctggacattgcactgtcagggctagagattctagtaggc
gtggacgaaaggtttagaaactgcaagattgatttgttcaatctcaagagtaaagaattg
gatagagaattgatgggagtggatgaaaataatcaaattaatgcctcgataagttcgtat
ttgcggttactatcaggacatcttcaactttctgcctctcttaaaacacttgagtacttg
atacgtcgatacaagattcatgtttacaatgttgaggatttggttttatgtgtgcttcca
taccatgacacgcatgcatttgttcgaatagttcagttaatcaacacagggaatagtaaa
tggaaatttttggatggtgttaaagcctctggtgcaccgcctcctaggtctgttatagtg
caacaatgtattcgagatatgggagttttggaggccttgtgcaactatgcatctctgaca
aagaaatttcaggcatcaagaccagtggttagcttttgcactgcagttattgttgaagtt
ttgggttgtgttgcaacaattgacagtgacattgtgaagagaatccatccgtttgtagct
tctggtcttcaatttggtgcaaaaggaggttctgatcacaaggctggtgctttgatgatt
gttggatttctagcaaataaagtggcattggctcctaaacttgtaaatagtttgattcga
acagttgctgaggttgctagggaagatgtaaaagagtcaactgatttgcaatggtttcgg
ttggcccttatggctttgataaatcttgttcagtcacagtctgttgatgtattcccaaag
aaggctttggaaagtttgagggatatcaaggatattggtgctgttcttctggaactatcc
aaggaatttaacatcgatagattccttgccatactgttggaagctctggttgatcaaagt
tcttatgatgactcatatcatcttgctttaatatcagtaatagattcagttcctctgagg
aatttagtggatcctattgtctcgaagattctactaacctgcatgaaattatctgagagg
gaaggcaaattggtatcttctgaatcagtaacctgggccaagaatgttttagctactatt
aataagaattatccatcacaatttcatggagctgttcacaagttcctagaggatgccaaa
gtacaatccaagaaagaagacactgtgtgtgagtttttgagtaaaatattggacgggaat
ttagatttatcaatagccttctcagagtccaaaatctggtttgcatcacaccatcctaag
cccgaggttcgacgtgctacattttcagggcttaaccgatctgctattcttaaaatgaat
tctcttgatgcacagaggcttgtagccattaaagatgctgtattgcgccagcttcatgat
gatgatttaacagttgttcaagctgctctgtctgtggatggattgactgaagtagttagt
ccttcagatcttcttgaagcattacgtgatgtgcttaagaaatgtctaagttttctgaca
ttaggttcgtcagttaactctactttgtcttgtgatgttcctgtttcattcctaaagatt
gccatgctcagcttccatgatcagatagattatttgaaagaagttgcttccatgatattc
tcactactactaattttgccagagactcataggttgagcttgaaggttttggatttggcc
aagacaataaaatggccatttttccagacacttgcagctgcatctggggaggaagtgttg
cagaaattactgtcaggatcctcagttgatgcggaggctgttggcagatttgagaagaaa
atgcagaagcgtggcactgtatctacagttaatatggaaattgttagaagtctatcggaa
gagttcttgatgcaacctactgagtatatgccttggcttaccagaagttgcgacaacttt
aaatcatcaaagacccttctctttttggttctgatgcagtcattttctatgttgataaac
aatggaaaatttttggtactttttgatgcttgctttccggttctgaagtctcagtgggaa
gcttttgggtctacacttggcaactctctacatgagttcaatgaagagatgcttgattgg
gattgcaaaaagtttctagatcagctttttgttgctgatgttgatacagtaaataagaat
attcttatatgcctattctggacgttacttgattcagcagtcaatgctgaattctttctg
gacgacaatgagaatggtattacccgagttcaggatttcttcatcttcgtagctggttct
agtttgaaggatgcattcaagaaacaccttcaagagcttgttgagaagcatctacatggc
ttccttacaaagtgcaaagtttcacctgttcgatttctgtctaggttttatacagcagaa
gaagttcctgctgcagttcaagtagagagccttcattgtttctcatttctctgttctcag
ctaaatgatagactaccatttgaacttttggctgaatttccctcacttcttcttccactc
accagtgacaatcaggctactaggattgctgccatggactgtattgaaaagctatataaa
ttgtggtgtcaagtggacttctccagcaagaaaaatggaaatactgcaatttggagccat
tttcttgatgaacttttgggcttgatggttcagcaaaagaggcttatattatctgacaag
aattttctcccttctttcttgacatgtttgcttggctcgtcttgtgagagcattttggtt
tctccaaacattgagcaaagatttaataaatctacaaaggagaaaattctggctttcata
ttaagttctgctctaaatctctctgaatctggaaagctaaaggttttatctttgctcaaa
ggattaggcaatgctattctgcatgttaaagagattgaggcattattatctctgcttctg
agaaaacgaagtcaatgctattttgaactggaaaactcatccctcaagttgtcagaaact
gaaattatgatcctgtgcttgcttttggagatgtgtattatgccctcatctcttggtgga
cagttttctgaacatgtgttcaaggcattgcaattggattctaagtctccagaagaccct
gccattaaagaaccctgtattactgttttacaaaagctaaacagtcaattctacagtggc
ttgacaaatgaggcacagggtcaaatatttcgacagctagtgcttttgtttcgcaacagt
aatagtgatattcatagtgcaaccagagatgcgttgctacgtttaactattgcttcgtct
acagtaggtgagatgcttgatcttgtatgtaaggaggatccagtcgcaattgtttcagct
gatggaaagaagaaaaagaaatcagccgctaatccaaagcctggttatgatttagttttt
aaaggagaacagactctctattttcttagctcccttcttgatgtgttgcttctgaagaaa
gacatatcaaacaggcagttccttgtcggtcccttatttaagcttatcaggaaagcattc
tccgatgaatgggtacatggtgttctcgctcaagatggaagttggatacaaacttctggt
gttcctcagtcgaagtctactgtaattgttgatgtacagaaaatattattgttaattctg
gatgatatttttgcttcattcatggatgaaagtagttccctgaaggatggcataatggat
aaaattgatatcaaactgctggttgattgtgctcgtttgacgaaggatggagtaacccgc
aatcatgtctttaccctgttatccactattgcaaagttagttcctaataggatattggag
cacatactggatatacttatggttattggagaatctgcagtctcacagattgatagccat
tctcaacatgtgtttgaagatcttatatctgctgttgttccatgctggctgtctaaggcc
aacaatacagaaaacttgcttcagattttcgtaaacatattgcctgaaattgctgaccat
agaaggctgtcgattgttgctttcttattgaggattttgggggagattgatagtttgtct
tcattgtttgtcctccttttccgttcattagtttcaagaaaaggactatcttgccttaca
gatacatactcttcagatagtttcttgtattctgcacaccaagactgggagtatgccttt
gccatacaaatatgtgggcagtactcgtgccgggtttggcttccttctatattaaaggtt
cttcaagtaatgagaccgaatgatctcactcaagaagtgtttatgcaattcttctttgcc
atgcattttgttttatacaaattgcaagacccagaatttgtattgaagcttgaatctagg
gagaactcagatagcatccagagaaaacttggagaacttgtagagcaggttgtctttctc
tcacaagttgttgatgcaagaagaaagcaaataggaattccagttggaagttggaaagaa
tttaaggcatgtgtgcatgctatattgaagacaattacaatgagtatgatgccttccaca
tgctttgaatacatcaccaaattacttggcaatgcggataacactgtgagaaagaaggct
ctcgagatattatgtgaaacacttaaggaccatgtctctgttaagtcaaagtgcaaggaa
aaaagagatctggatccaaattcaaatagctatgagctccatttggatgatactgctctt
gaatattttcagaagatgtgtacagaaattgttcagatagttgatgattctattgatgaa
tcaaatgtgtcattgaaactggctgcactttcaacactggatatcctggcacagaggttt
tcttctaatcattcagtctttggcatgtgccttgcatcagttacgaaaggcatcagttca
gacaacatggctgtctcttccagctgccttaaaacaactggcacattggttaatgtcctt
ggaccaaaggctctggctgagcttccttgtatgatggaaaatgttattcggaagtctcgt
ggaatatctgagagttccaatttagaaagcagaagtgatgaatctacttccattttgctg
tctattcttataactttggaagcagttgttgagaagcttgggggatttttaaacccatat
cttggagatatcatagaactaatggtacttcatcctgcatatgtgtcagcttcagatcta
aagctgaaaaccagagctgatttagtgcgaaagctcttgactgataagatacctgttcga
cttacttttcagcctttgctaaagatatactcgggtgctgttaaatctggagattcaagc
ttggtgattgctttccaaatgttagcagatctagttagtaaaatggataggacatcagtt
agtggctcctatggaaagatttttgaccaatgcatggttgctcttgatttgcgtcggcaa
catcctgttacagttcaaactattgatgctgtagaaaaaagcgttatcaatgcgataatt
tctcttacaatgaaactaacagagaatatgtttaaacctctttttgccaagagtattgag
tgggccgagacggagtttcaagatgttgctggtagtggaaccatgaatattgacagggct
atatcattctatagcctggttaataaacttgtggagaatcataggtctttgtttgtcccc
tacttcaagtacttggtcaagagttgtgtacagctgcttagtgattctgcagataaagct
tctgatttagtacggaagaaaaagaaacccaaggttcaggaggatgggaatattgtaaat
ggcggcgtatcacttaaaagttggcatcttagggcattgatcttatcatcactacacaaa
tgttttctccatgacactggaaggcagaagtttctcaattcatcaaactttcaggtttta
ttgaagcccattgtttctcagcttgtcattgagcctccaacttccgttgaagagcaaacc
gatgtaccgtctctgaaggaagtagatgacttgctggttgtttgcataggtcagatggct
attactgctggaactgacctgctgtggaagcccctgaaccacgaggtattgatgcaaaca
cggagtgagaagatgcgtgctcgagtgttggggttgagaatagttagggaatttctggag
aaattaaaagaagaatatttggtactgctaccagaaaccatccccttcctaggtgaattg
ctggaagatgtggagttaccggtcaaatcattggcacaagatatcctcaaggagatggag
actatgagtggtgaaaaccttcgcgaatacctctga
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