KEGG   Gossypium arboreum (tree cotton): 108451349
Entry
108451349         CDS       T05776                                 
Name
(RefSeq) protein RRC1-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108451349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108451349
Spliceosome [BR:gab03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108451349
 Complex B
    108451349
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 CTK3 RRM_7
Other DBs
NCBI-GeneID: 108451349
NCBI-ProteinID: XP_052874316
LinkDB
Position
8:complement(165416..173203)
AA seq 971 aa
MSSFSITRKKTPFQKHREEEEAKKKREDDETARLYEEFVASFQGDNAPGSKAFVRGGTIN
PNEKFKPDSAGEKSKDGVSVAKKGSRYVPSFIPPPLAAKGKESEKKKEEEKPKEREKGKS
RNIDHFMEELKHEQEMRERRNQDREHWRDGRHSDNSAPSSRFDELPDDFDPSGKLPGSFD
DGDPQTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMN
RADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSMEGSSIILSGPS
GPPVTSVPNQNSELVLTPNVPDIMVTPPDDDHLRHVIDTMALYVLDGGCAFEQAIMERGR
GNPLFSFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWVPPPLPTTRSP
EHEKDYTATYAAGRSRRLEPERTLTDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAA
GEIVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYRTKFEATLPDIMESF
NDLYRSVTGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRSTFLRSGNSGVAPFHSIC
GNAPAIENKISSEDAVNGIKANQDAALAMGKGAAMKELMDLPLAELERRCRHNGLSLVGG
REIMVARLLSLEDAEKQRNYELDDELKFRSSSSRYLSGQRGANAKPESVGLSEWTCFGED
EIHSEHKVSVPLAETFPVPQPELKAFTKKDKTDPVLPASKWAREDDDSDDEEKRSTRLSS
GSETAGDGPSKADELEFGTHMNTSAPSESAINEEQRKKLRRLEVALIEYRESLEERGTKN
AEDIERRVAVHRKRLESEYGLTDSGEDTSGRKRRDRRDDARDSASKRHRSESRSESPPWK
SSNRDRDRENGSEKEQERHRDRDRDRSRGRELESERGRERERDYREKSGSRERDDHDRDR
GRERDRRRRMN
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgagttcattttcgatcacacgcaagaaaacgcctttccagaagcacagagaagaggag
gaagccaagaagaagagggaggacgatgaaactgctcggttatacgaggagttcgtggct
tcttttcaaggagacaatgcacctgggtcaaaggcatttgttcgaggcggaacaatcaat
cccaatgagaaattcaagcccgattctgcaggtgaaaagtccaaagatggggtgtctgtt
gcaaagaagggaagtaggtatgttccatctttcataccacctcctttggcggccaaggga
aaggaatctgagaagaagaaggaggaggagaagccaaaggaaagagagaaggggaagtct
cggaacattgatcattttatggaggagctgaagcatgaacaagaaatgagggagagaaga
aatcaggatcgcgaacattggcgcgatgggcgtcatagtgacaattcagctccatccagt
cgctttgatgaactccctgatgattttgatcctagtggaaaactgcccggatcgtttgat
gatggtgatcctcaaacaacaaatctttatgttggaaatctctcaccaaaggtggatgaa
aattttcttcttcggacttttggaagatttgggcctattgctagtgtgaagattatgtgg
cctaggacagaggaagagcggcggcggcaaagaaattgtggctttgtagctttcatgaat
agagctgatggacaagctgcaaaagatgaaatgcaaggagttgttgtatatgaatatgag
ttgaaaatcgggtggggtaaatctgttgctcttccatcacaagcattacctgctccccca
cctggacacatggccatcaggagtatggagggtagttctataatcttatctggtccttcg
ggcccacctgtgacatctgttccaaatcagaactctgaattggttcttactccaaatgtt
ccagatataatggttaccccccctgatgatgaccatcttcgccatgtcatcgatacaatg
gctctttatgttcttgatggaggatgtgcttttgaacaagctattatggagaggggtcgt
ggcaatcctctattcagctttttgtttgagcttggctcaaaggaacatacttactatgtc
tggagattatattctttcgctcagggtgatacacttcaaaggtggcggacggagcctttt
atcatgataactggtagtggaagatgggtaccacctcctctgccaactacaagaagtcca
gagcatgaaaaggactacactgccacatatgctgcaggaagaagcaggcggctggagcca
gaacgaacacttactgatcctcaaagggatgaatttgaggatatgctacgggccttgact
ttagagaggagtcagattaaggaagctatgggatttgctttggataatgctgatgctgct
ggggagatagttgaagttttgacagagtccttgacacttaaagagacaccaattccaact
aaagttgcaaggcttatgctcgtctctgacatccttcataacagcagtgctcctgttaaa
aatgcatctgcataccgtaccaaatttgaagcaacgttgcctgatataatggagagcttt
aatgatttgtaccgcagtgtgacgggaaggatcacagccgaggcccttaaggaaagggtt
ctgaaagtgttgcaagtatggtcagactggtttcttttttcagatgcatatgtgaatgga
ctgcgatctacttttcttcgatcaggaaactctggtgtggccccttttcattctatatgt
ggtaatgctccagcaattgaaaataagattagttcagaagatgcagttaatgggattaag
gccaatcaagatgctgctttggcaatgggcaaaggtgcagctatgaaggagctaatggat
ctcccacttgctgagctggaaagacgttgtagacataatggattgtctcttgttggtggt
agagaaataatggttgctcgacttttaagtttggaagatgcagaaaagcagaggaattat
gaactagatgatgagctgaagtttcgatctagttctagtaggtatcttagtggtcagaga
ggtgcaaatgctaagccagagtctgtgggattgtctgaatggacctgttttggagaggat
gagatccattcagaacacaaagtttctgtacctttggctgaaacctttccagtcccacag
cctgaactaaaagcattcacgaagaaagataaaacggatcctgttttgccagcctctaaa
tgggctagagaggatgatgacagtgatgatgaagaaaagagaagcactcggttgtcttct
ggaagtgagactgctggtgatggccctagtaaggctgatgaattggagtttggaactcat
atgaatacttcagctccatctgaaagtgcaatcaatgaagagcagaggaaaaagttgaga
cgtttggaggttgctttgatagaatatcgagaatcccttgaggagcggggaactaaaaat
gccgaggatattgagagaagggttgctgttcaccgaaaacggctagaatctgaatatggt
ttaacagattctggtgaagatacttcaggaagaaagaggagagataggcgggatgatgca
cgtgactctgcaagcaagcggcatcgcagtgaaagccgaagtgagagccctccgtggaaa
tcatcaaacagagacagggatagagaaaatggttcagaaaaggaacaagaaaggcacagg
gatagagatagggatagaagtagaggtcgagaactggaaagtgaaagggggagagaaagg
gagcgagactatcgtgaaaagagtggaagcagggaaagggatgatcatgacagggataga
ggcagagagagggataggagaaggcgaatgaattga

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