Gossypium arboreum (tree cotton): 108452019
Help
Entry
108452019 CDS
T05776
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108452019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108452019
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108452019
mRNA degradation factors
5'-3' decay
Lsm complex
108452019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
108452019
NCBI-ProteinID:
XP_017605275
UniProt:
A0A0B0PWG1
LinkDB
All DBs
Position
7:complement(104264109..104267046)
Genome browser
AA seq
128 aa
AA seq
DB search
MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGNL
YCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTAVSAAEIKRAQKAEREATDLKGSMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctggccctgatgatatctttctctccacttcccttgctacttatctagac
aagaaactccttgtcttgcttagagatggccggaagcttttgggattactacgttcgttt
gatcaatttgctaatgttgttctagaaggcgcttgtgagcgagttattgttggcaatttg
tactgtgatatccccttgggtctatatgtaatccgtggggagaatgttgtcttaatagga
gagctggacttggaaaaggaagagcttccatctcatatgaccgctgtgtcggctgctgag
attaaaagggcacagaaagccgaaagggaagcaacagatctgaagggctccatgagaaaa
cgaatggagtttctcgatttcgactaa
DBGET
integrated database retrieval system