Gossypium arboreum (tree cotton): 108452053
Help
Entry
108452053 CDS
T05776
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108452053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108452053
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108452053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108452053
NCBI-ProteinID:
XP_017605280
LinkDB
All DBs
Position
2:76013..85206
Genome browser
AA seq
1230 aa
AA seq
DB search
MGSIKRLPDAVRSTVRSATILFDLTRVVEELIFNSLDAAATKVSVFLSVGSSYVKVVDDG
SGISRDGLVLLGERYVTSKLNHLSDLDAAGSSFGFRGEALASISDVALIEIVTKAYGRPN
GYRKVIKGSKCLYLGIDDDRKDTGTTVVVRDLFYNQPVRKKQMQSSPKKVLQSVKKCVFR
IALVHPMVYFNLIDIESEDELLSVNPSSSPLPLLMSGLGIEDCACLQKLNASDGSLKLSG
YISGPCDDFTSKAFQYVYINSRLVCKGPIHKLLNNLSTSFESLHPEKANNWTKNGKRSRS
QVVPSYIINISCPPSFYDLTFEPSKTYVEFKDWKPVCTLIETAVQHLWRKNISYVDGLGQ
AETLKEDVNILNVAEDFFDGSSVDLEFATRKRTKKYQPSSSLDKLTIDNLFHMDREDTPF
EECNGNTAQFKDQQNDMKFVHWTDYSFQSLGDSLSKGGSVVNQRSDWHLWSSDNNILAED
HFLENRFIASGRPNYHVNNNNISSKLGNESLKFESCVTNETVRSVFPFDSRELCNDMQFR
KNISKPFMQSCSFQRNQPLDRELVESDVGVDSPIDSLKTKRKWVCSNDGFNMMEVDFSDQ
TFDHLSKTAWQDGPKLVGTDNIPMDCDVLRGASAKLFLSCGDVSVEENGLVSGSVMLAEN
FASSHQFLSLGLRSGTSNLFAQFSYKNAIEGSFRSEKRTNFGHFSDGEDKDNQFGFDLIS
RGSSQEKCIHDFPNTEQGIDYAESSREFSEHLQQDNLKHKFSPEQFNVVIEDGDWPCSDS
SINEHKRKRDCFRYQDFGKNFSPKERSRRSQSAPPFYIRKRRFISLHHCLQTSEESTSNE
VHGPYTFLETGDKKPPQHSSGLHNRCFEPNFGKNRSNMNNKPDKVHGPIVQKCDKIEQPY
CREDPELVPVQGISVLSPEEILVFKLFPSYGNQDPLISGTKWRKTRNNKLYDADNEDTLL
DIASGFLNLAAESLVPKSISKKCLTEAKVLQQVDKKFIPIVAGGKLAIIDQHAADERIQL
EELRRKVLSGEGKSVAYLDTEKELILPEMGYQLLHNFSEQIRHWGWICDFHTQDSRSFKK
NLNLIQRKPAVVILLAVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVSRILNSKACR
GAIMFGDSLLPSECSLIVEELKQTSLCFQCAHGRPTTAPLVNLEALHGQIAKMQVRDDEG
RELWHGLCRQGVSLERASLRLRAAADEKPS
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggggagtattaagcgcttgccagatgctgttcgtagtacagtgcgttctgccactatc
ttgtttgacctcactagggttgtggaggagctcattttcaacagcctcgatgctgctgcg
acaaaggtgtcagtctttctaagtgttgggagcagctatgtcaaagtggtggatgatggg
tctggtatatctcgggatggattggtgctactgggagaaagatatgtaacgtccaaactt
aaccatcttagtgatttggatgctgctggcagtagctttggctttcggggagaagctcta
gcttctatatctgatgtagctttgatagaaatagtaacaaaagcttatggaagaccaaat
ggataccgcaaggtgataaaggggtccaagtgtttgtatcttggaattgatgatgatagg
aaagatacgggcacaacagttgttgtgcgtgatttattttacaatcaacctgttcggaag
aaacaaatgcaatcaagcccgaagaaggtgttgcagtctgttaaaaagtgtgtattcaga
attgctcttgttcacccaatggtttacttcaatcttattgatattgagagtgaggatgag
cttctctctgtgaatccttcctcttcccctttgcctcttctgatgagtggtcttggaatt
gaggattgtgcctgtctgcagaagctgaatgctagtgatggttccctcaagctttcaggc
tacatatctggaccttgtgatgattttacttctaaggcctttcaatatgtctatatcaat
tcaagacttgtctgcaagggtcccattcataagttgctgaacaacttgtctactagtttc
gagtctttacatccagagaaggctaataactggaccaagaacggaaaaaggagtagatct
caagtggttccatcatacataattaacattagctgcccaccatctttctatgatttaacc
tttgaaccatcaaagacatatgtcgaattcaaggattggaaacctgtatgtaccttaatt
gagacagcagttcaacacctctggaggaaaaatattagttatgttgatggattaggacaa
gcagaaaccctgaaggaagatgtaaatattttaaatgttgcagaagatttttttgatgga
tcatcagtggacttggaatttgcaacgaggaagaggactaaaaagtatcaaccatcttct
tcattggacaagctaaccatagataatttgtttcatatggaccgtgaagatacgccattt
gaggagtgcaatgggaatactgcacaatttaaagatcagcagaatgatatgaagtttgtt
cattggactgactattcttttcaaagtttgggtgattccctttccaaaggtggctccgta
gtaaaccaaaggagtgattggcatctttggtcatctgataacaatattttagcagaagat
cacttcttggaaaatagatttattgcttcaggaagaccaaactatcatgtgaacaacaat
aatataagttcaaagttaggtaatgaatccctcaagtttgagagttgtgtgaccaatgaa
acagttaggagtgtttttccttttgatagtcgtgaactttgcaatgacatgcagtttagg
aaaaatatcagcaaaccttttatgcaaagttgctccttccaaagaaaccagccacttgac
agggagttggttgaaagtgacgtaggagttgactcaccaattgatagccttaagacaaaa
aggaagtgggtctgctcaaatgatggcttcaatatgatggaagttgatttcagtgaccag
acatttgatcacctttcaaagaccgcatggcaggatggacccaagcttgtaggaacagat
aacattcctatggattgtgatgttttaagaggagcttctgcaaagttgtttctgtcatgt
ggagatgtttctgttgaagaaaatggcctagtatctggttcagtcatgctagctgaaaac
tttgcctctagtcatcagttcttaagtttgggattgcgttcgggaacctcaaacctcttt
gcacaatttagttataagaatgcaatagaagggagtttcagatctgagaaaaggactaac
tttggtcatttctctgatggtgaagacaaggacaaccaatttggttttgatctaatctca
aggggctccagccaagaaaaatgcatccatgatttcccaaacactgaacaaggaattgac
tatgctgaatccagtagggaattctctgagcaccttcaacaagacaatctaaaacataaa
ttttctccagaacaattcaacgtagtaattgaagacggagattggccttgttcagactca
agtattaatgaacataaaaggaaaagagattgctttcgttatcaagattttggaaaaaac
tttagtcctaaagaaagatcaagaagaagccagtcagctcctcctttttacatccggaag
aggaggtttatctccttacatcattgtttgcagacgtcggaggaatctacttctaatgaa
gtccatggtccatacacctttttagagactggtgataagaagcctccacaacattcttct
ggtttgcacaatcgatgctttgaacctaattttgggaagaatagatcaaatatgaataac
aaaccagacaaggtgcatggtcccatagttcaaaaatgtgataagattgaacaaccttat
tgccgagaggatcctgaacttgttccagtgcaaggtatttctgttctttcaccagaagaa
atacttgtatttaagctatttccctcatatggaaatcaggatcccctaatttctggaacc
aaatggagaaaaacaaggaataacaaattatatgatgctgacaatgaagatactttactt
gatatcgcttctggattccttaaccttgctgctgaatcattggttcctaaatcaattagt
aagaagtgtctcacagaggccaaggttctgcagcaggtggataagaaattcatcccaatt
gtagctggtggaaaacttgctatcattgaccagcatgctgcagatgaaagaattcaacta
gaagaacttcgtcgcaaggtcttatctggtgaagggaagtcagtcgcctatttggataca
gagaaagagctgatcctgccagagatgggatatcagttgctgcacaatttttctgaacaa
ataagacattggggttggatctgtgactttcacacgcaagattcaagatccttcaagaag
aatttgaaccttattcagcgtaagccagctgttgtcatacttcttgcagtaccttgcatt
ttaggtgtcaatttatctgatgttgatctattggaatttcttcaccagcttgctgatacg
gacggatcatcaacaatgcccccatctgttagtcgcattcttaattccaaagcatgccga
ggtgcaattatgttcggagactccttgcttccttcagaatgttccttaattgttgaagag
ctaaagcagacctcgctgtgcttccaatgtgctcatgggcgaccaaccactgccccgctt
gtgaatttggaggcattgcatgggcagatagctaagatgcaagtgagggatgatgaaggc
agggagttatggcatgggctatgccgacaaggagtgagccttgaaagggccagcttgcgg
ttaagagcagctgctgatgaaaaaccaagctaa
DBGET
integrated database retrieval system
