Gossypium arboreum (tree cotton): 108452399
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Entry
108452399 CDS
T05776
Name
(RefSeq) lysine--tRNA ligase-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108452399
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gab01007
]
108452399
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108452399
Enzymes [BR:
gab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
108452399
Amino acid related enzymes [BR:
gab01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108452399
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108452399
Prokaryotic type
Other AARSs
108452399
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
LPP20
Motif
Other DBs
NCBI-GeneID:
108452399
NCBI-ProteinID:
XP_052875467
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Position
9:80965012..80969057
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AA seq
594 aa
AA seq
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MQLSMDSFVSEPGPASSETLSNNALKRERRARERQVREEEKKKVTTNKTPENQRQQVANN
DTMDPSQFLSNRIKSLALLKESGVNPYPHKFEISMSITEFIDKYRSLHVGEHVENTEISL
AGRILNKRSSSSKLYFYDLHGNGAKIQVMADARHSNMDEHEFCKYHSGVKRGDIVGICGF
PGKSQRGELSIFPRSLVVLTPCLLMLPRHTVTSNSDEAQSKKTRNHSWTPGITRNPETNI
LRDQETRYRQRYLDLMLNSEVQKIFRTRAKIISYSRDFLDNLGFIEVETPAMTMTAGGAA
ARPFITHHNELNMKLYMRISPELYLKKLVVGGLDRVYEIGKVFRNEGMDLTHLPEFTMFE
FYMAYADYNDLMGIIEKLLSDMVKELTGSHKIKYHGNGFDSEPVEIDFTPPFRRIDLIEE
IESRANLSIPKDLSSETANKFLLEACEKFDVKCPAPHTTTRLLDKLVGLEETCINPTFII
NHPEIMSPLAKWHRSKPGLTERFELFVNKKELCNAYTELNDPQVQRQRFAEQLKDRQLGD
DEAMVLDESFCSCLEYGLPPTAGLGMGIDRLAMLLTDSPNVKEVILFPAMKPQD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcagttatcaatggattcgtttgtttcggaacccgggccggcttcatctgaaactctc
agcaacaatgctcttaagagagaacggagggcaagagagaggcaagtcagagaagaggag
aaaaagaaggtgaccacaaataagacaccagagaatcagaggcaacaggtggcaaataat
gataccatggatccttcgcaattcctcagcaacagaatcaaaagtttggcattactaaag
gaatctggtgtaaatccgtaccctcataagtttgaaatttcaatgtctatcactgaattt
attgacaaatatagaagtttgcacgttggtgaacatgttgagaacactgaaatctcctta
gcagggagaattttgaacaagaggtcatcatcgtcaaaactatatttttatgatcttcat
ggaaatggtgctaaaattcaagtaatggcagatgcaaggcattccaacatggatgaacat
gagttctgtaagtatcactctggggtgaagcgaggtgacattgtagggatatgcgggttc
cctgggaagagtcaaagaggggaattaagtatttttcctaggtcactcgtggtactcacc
ccatgcctgctcatgcttccaaggcatacagtcacctccaacagcgatgaagcacagtct
aagaaaacaagaaatcattcatggacccctggaataacaagaaatcctgaaactaacatc
ctcagagatcaggaaactcgatatcgtcaacgttatctagacctgatgttgaactcagag
gttcagaaaatattcaggaccagggccaaaatcatatcttactccagagacttccttgac
aatcttggattcatagaggttgaaacccctgcgatgactatgactgctggaggagctgct
gctcggccattcatcacacatcataatgaattgaatatgaagctctatatgcggatatca
ccagaactgtatctcaagaaactagttgtcgggggacttgatcgagtttatgagattggg
aaagtatttaggaatgagggaatggatctaactcatcttccagaattcacaatgtttgaa
ttttacatggcctacgcagattataatgacttgatgggcattatagagaagctgttatca
gatatggtgaaggagctgacagggagccataaaatcaagtaccatggtaatggattcgac
agtgaacctgtagagattgattttactccgccttttagaaggattgatttgatagaggag
atagagtctagggcgaacctcagcatacccaaagatctttccagcgaaactgccaataag
tttttgttggaagcttgtgaaaaatttgatgtcaaatgccctgctccccacaccacaact
cggttgttagacaagcttgtgggccttgaagaaacgtgcataaaccctacttttatcatc
aaccatccagagataatgagtcctctggcaaagtggcacagatcaaaaccggggttaacc
gagcgcttcgaattattcgtgaacaagaaagagctatgcaatgcatatactgaattgaat
gatcctcaagtacagcgccaaagatttgctgagcagctcaaggatcgacaattgggagac
gatgaagcaatggtgttggatgaatcattttgcagttgtttagagtatgggttgccccca
actgctggactgggaatggggattgatcgcctagctatgctgcttacggattcaccaaat
gtcaaggaagttatcctttttccagcaatgaagcctcaagattag
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