Gossypium arboreum (tree cotton): 108452409
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Entry
108452409 CDS
T05776
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108452409
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108452409
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
108452409
NCBI-ProteinID:
XP_052883683
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Position
5:complement(5108214..5110056)
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AA seq
341 aa
AA seq
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MGMVGLRDFVLVTPASFNHHHRHHHTQDSIMANDQINGPNDLTALGVGVIPLLTTAPCLA
PHHAEDTDLLNNNDRSKFTGMQLWQNPNSSHYLKKSSKNPNNHNSSSMNLIQSSGGIGGT
ESRSGGSGSSSGATCQDCGNQAKKDCRYRRCRTCCKSRSFDCPTHVKSTWVPAARRRDRQ
LMTVGATAAGAGAGLSGSSAGPKKPRLRTSQTTTASHTSTSNATTPPRSLDTCSSPQNAE
FKEPFPAQVRATAVFKCVRVTAIEEGEDEFAYEAVVKIGGHVFKGLLYDQGVDGFPNISQ
LHLSGRNGESSSSPVLDPSQVYEATTGGGLLRGSNYGSARN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggggatggttggtctccgagatttcgtccttgttactcctgcgtcatttaaccatcac
catcgccaccatcatactcaagattccatcatggcaaacgatcaaatcaacggtccaaat
gatctcacggcacttggtgttggtgttatcccacttcttacaacagctccatgtttagct
ccacatcacgcggaagacactgatttgttgaataacaatgatcgcagcaaattcaccggg
atgcagttatggcagaacccaaattcttctcattatcttaaaaaatcgtctaaaaaccct
aataaccacaattcctcttctatgaatttgatacaaagcagcggtggtatcggtgggacg
gagagccggagtggtggttcgggttcaagctcaggggccacgtgtcaagactgtgggaac
caagctaagaaagattgtagatataggagatgtagaacatgttgtaaaagtcgaagtttt
gattgccctactcacgtgaagagcacgtgggtgccagctgctagaaggagagatcgtcag
ctcatgacggttggagctactgctgctggtgctggtgctggtttgtcaggctcgagtgca
gggcctaagaagcctagacttagaacatcacagactacaaccgcttctcatacatcgact
tccaacgctacaactcctcctagaagcttggacacttgctcaagtccccaaaatgcggag
tttaaagagccatttccggcgcaagttcgtgcaacggcggtatttaagtgtgtaagagtg
acggcaatcgaggagggggaggatgagtttgcatatgaagcagttgttaagattggtgga
catgtgttcaaagggttgctctatgatcaaggagttgatgggtttcctaatatatcccaa
ctgcatttaagtgggagaaatggcgagtcatcctcatctcccgttctcgatccttctcaa
gtttatgaagcgaccactggaggcggcttgcttcgtggttcgaattatggtagtgcaagg
aactga
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