KEGG   Gossypium arboreum (tree cotton): 108452847
Entry
108452847         CDS       T05776                                 
Name
(RefSeq) coatomer subunit beta'-2-like
  KO
K17302  coatomer subunit beta'
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108452847
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gab04147]
    108452847
Membrane trafficking [BR:gab04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    108452847
Exosome [BR:gab04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   108452847
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_IFT140_1st ANAPC4_WD40 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_Nup120_160 WD40_like WD_LRWD1 TPR_CcmH_CycH HEAT_GCN1 TPR_8 Clathrin
Other DBs
NCBI-GeneID: 108452847
NCBI-ProteinID: XP_017606113
LinkDB
Position
5:complement(10313147..10323895)
AA seq 919 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKGSRRIVIGYDEGTIMVKIG
REVPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESSSKIKIFSKNFQ
EKKSVRPTFSAERIFGGTLLAMCSNDFICFYSWAECRLIRRIDVTVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVQSYLDSGTPVDEQGVEDAFELLHETNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERANEILPSIPKEHLNSVARFLESRGMIDDALEVATDPDYRFELAIQLGKLEIARE
IATEVQSESKWKQLGELAMSTGKLEMAEQCMKHAMDLSGLLLLYSSLGDAEGISRLASLS
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRRDLNK
VNPKAAESLADPREYPNLFEDWELALSVESKVAETRGVYPLAVDYLNHADRSKMTLVEAF
RNMQIDDEEPLMNDEEPLVNGVLDYEAGEPHGHGLNSEEQNGEDGSQEEPVVVDADSNDG
AVLVNGNEPEEEWVLTPDH
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgccacttagacttgaaattaagaggaaacttgctcaaagatcagagagagtaaaatcc
gtagatctccatcctactgaaccatggattctagcaagtttgtattctggaactgtctgc
atctggaactaccagtcacagaccatggctaagtcatttgaggtcactgagttgccagtt
aggtcagcaaagtttgttgcacgcaagcaatgggttgtcgctggagctgatgacatgttt
attcgtgtatacaattacaacaccatggataaggtcaaagtatttgaggcacataccgat
tacattagatgtgtcgctgtccatcctactcttccatatgtgttgtcatcatctgatgat
atgctcataaagctttgggactgggagaagggttgggtgtgtactcagatatttgaggga
cattcccattatgtcatgcaagtgacctttaatcccaaagatacgaacacttttgccagt
gcatctcttgaccgtaccataaagatttggaaccttggctcccccgacccaaattttact
ttggatgcccatcagaaaggtgtaaactgtgttgattactttacaggtggtgataagccc
tacctgatcactgggtctgatgatcacactgctaaggtatgggactaccaaaccaagagt
tgcgttcagacattggaaggccacacacacaatgtttctgcagtttgtttccatcctgaa
cttccaattattattactggttctgaggatgggacagttcgaatctggcatgctaccaca
tataggcttgaaaatacattgaattatggtctcgagagagtttgggcaattggatatata
aaaggttcacgaaggattgtgattgggtatgatgaaggaactattatggtgaaaattggt
cgtgaagttcctgtagcaagtatggataacagtgggaaaataatttgggctaagcacaat
gaaattcaaactgtgaatattaagagtgtaggagcagattttgaggttactgatggagaa
aggttgcccttggctgtaaaggaattagggacatgtgatctatatcctcaaagcttaaag
cataacccaaatggtaggtttgttgttgtctgtggagatggtgagtacatcatatataca
gcattagcatggagaaataggtcatttggttcagcattggaattcgtttggtcatctgat
ggagagtatgctgtcagagaaagctcatcaaagataaaaattttcagcaaaaatttccag
gaaaagaagagtgtccggccaaccttctctgctgagcgtatttttgggggcactttactg
gcaatgtgctccaatgattttatttgtttttatagttgggctgaatgcagattgattcgt
cggattgatgttaccgttaaaaatctttactgggctgatagtggtgacttggtggcaatt
gccagtgatacatcgttctatatcctaaagtacaatcgggatgtagttcaatcatactta
gatagtggaacaccagttgatgaacaaggagttgaggatgcatttgagcttcttcatgaa
accaatgaacgtgttaggactgggatatgggttggggactgtttcatttacaacaactct
tcatggagacttaattactgtgttggtggagaggtcaccacaatgtttcatttggaccgt
cctatgtacttgttgggatatcttgctagtcaaagtcgggtgtatctgatagacaaagag
tttaatgtaatgggatacacgttacttctcagccttattgagtacaagacacttgtgatg
cgtggagacttggaaagggccaatgagattttgccttcaattcctaaagagcaccttaat
agtgtggctcgtttcctagaatcacgaggtatgatagatgatgctctagaagttgctaca
gaccctgattacagatttgagcttgccattcagcttggtaaattagagattgccagggaa
atagccacggaagttcagagtgagtccaaatggaagcaattaggagaattggctatgtcc
actggaaagctagaaatggctgaacaatgcatgaagcatgcaatggacctgagtggttta
ttgctgctttattcctcattaggagatgctgaaggaatatcaagacttgcatctctttcc
aaagagcaagggaaaaacaatgttgcttttctttgtttattcatgttgggtaaattagag
gattgccttcagcttttggtggaaagtaatcggatacctgaggctgctctgatggcgcga
tcttatcttccaagcaaggtttcagagatagtagcaatctggagaagagacctcaacaag
gttaatccaaaagctgctgaatctttggctgatcctagagagtatccaaacttgtttgag
gattgggaacttgctctttctgttgaatctaaagtggcagaaacaaggggtgtttacccc
cttgcagtggattatttgaaccatgctgatagatcgaagatgacacttgtggaggctttc
agaaacatgcaaattgatgatgaggagcctcttatgaatgatgaggagcctcttgtgaat
ggtgtacttgattatgaggctggagaaccacatgggcatggtctgaattcagaggagcag
aatggagaagatggtagccaagaggagcctgttgttgtagatgctgattctaacgatggt
gcagtactcgttaatggtaacgagccagaagaagagtgggtgcttacaccagatcactag

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