Gossypium arboreum (tree cotton): 108452876
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Entry
108452876 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108452876
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108452876
Enzymes [BR:
gab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
108452876
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
108452876
Prokaryotic type
Methylthiotransferases
108452876
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
WD40_Apc4_C_fungal
Motif
Other DBs
NCBI-GeneID:
108452876
NCBI-ProteinID:
XP_017606144
UniProt:
A0ABR0Q0Y2
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All DBs
Position
5:complement(28065727..28074917)
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AA seq
617 aa
AA seq
DB search
MEDIEDLLVGSGGAPPGFRLPLNAVGVNPRKKNKAKPSKVSQMNDPPKIPGTQTIYVKTF
GCSHNQSDSEYMAGQLSAFGYAISDNPEEGDLWLINTCTVKNPSQSAMNTVITKCKSAKK
PLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPSLDLPK
VRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVKTVIADGVREIWLSSE
DTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKEIAAVLCHPCVYS
FLHVPVQSGSDAVLTAMNREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFSQ
TVNLIKEYKFSQVHISQFYPRPGTPAARMKKVPSTIVKNRSRELTSVFEAFTPYNGMEGK
VERIWITEIATDGIHLVGHTKGYVQVLIVAPETILGTSAIVKITSVGRWSVFGEVLESLP
QVNVKMAPDKVSNQEKHSPCSNQYECCACSKEPEPCSCGPDICGGQIKLDKCTVSKNDSP
MENRASKNPIHWFIRKRRNHAQKKLENDIALGLENEQDWAPGGWGFVDRALLVGIFVSFF
MIVAVIMHLEFRTLLSK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaagatttgttggtcggcagcggcggagctcctcctgggtttaggtta
cctttgaatgcggttggagttaatcccaggaaaaagaacaaagccaaacccagcaaggtt
tctcaaatgaatgatcctcccaaaatccctggcactcagactatttatgtcaagactttt
ggatgctcacataaccagagtgacagtgaatatatggcgggtcagctttcagcatttggc
tatgcaatatctgacaatcctgaggagggagacctttggctaataaatacatgcacagtg
aaaaacccaagtcagtcagcaatgaacacggtaataacaaaatgcaaaagtgcgaaaaag
ccactggtggttgctgggtgtgttcctcaaggaagccgagatctgaaagagctagaaggg
gttagtatagttggagtccagcaaattgaccgtgttgttgaagttgtagaggagaccctg
aaaggccatgaggtgcggcttttgaatcgcaagactttgccatcgctggaccttcctaag
gtcagaaagaacaagtttgttgagattcttccgattaatgttggttgtttaggtgcttgc
acttattgcaagacaaagcatgctcgtggtcacttagggagctacactgttgacagtctt
gttgagcgtgtcaaaaccgttatagctgatggggtcagggagatatggttgagcagtgaa
gatactggagcatatggtcgtgacattggggttaacctaccaattttgttgaatgccatt
gttgcggaacttcctcctgatggaagcacaatgctacgaattgggatgaccaatcctcct
tttatcttggagcatctgaaagagatagcagcagttttatgtcatccttgtgtatattcc
tttcttcacgttccggttcaatctgggagtgatgctgtcttgactgctatgaatcgggaa
tatactgtgagtgagtttaggactgtggtagataccttgactgaacttgtgccggggatg
cagattgcaactgatataatatgtggatttcctggtgaaactgatgaagatttttctcaa
acagtaaaccttattaaagaatacaagttctctcaagttcatatatcacagttctatcct
agacctggaactcctgctgcaaggatgaaaaaggtcccaagtactatagtgaagaatcgg
agccgtgaattaacttctgtttttgaagcttttacaccgtacaatggaatggaaggcaaa
gttgaaagaatatggattactgaaattgcaactgatggaattcacttggttggccatacg
aagggatatgtgcaggttctcatagttgctcctgaaactattttgggtacttcagctatc
gtgaagataacatctgtgggaagatggtcagtgtttggagaagtgctcgagtctctcccc
caagtaaatgtaaaaatggctccagataaggtttctaatcaggagaaacattctccttgc
tccaaccagtacgagtgttgtgcatgttcaaaggagccagaaccttgctcttgtggacca
gacatctgcgggggacagattaaattggataaatgcacggtttccaagaatgatagtcca
atggaaaatcgagccagcaaaaatccgattcactggtttataaggaagcgaaggaaccat
gcgcaaaaaaagttggagaatgacattgccttggggctagagaatgagcaggattgggcc
ccgggcggctggggttttgttgatagggctcttcttgttggaatctttgtcagctttttt
atgattgttgcagtaataatgcatctagaattcaggactttactatcaaaatga
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