Gossypium arboreum (tree cotton): 108452959
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Entry
108452959 CDS
T05776
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gab01001
]
108452959
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108452959
Enzymes [BR:
gab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108452959
Protein kinases [BR:
gab01001
]
Serine/threonine kinases: Other
Other
108452959
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108452959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WDR55
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
LisH
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
EIF3I
Motif
Other DBs
NCBI-GeneID:
108452959
NCBI-ProteinID:
XP_017606270
UniProt:
A0ABR0P759
LinkDB
All DBs
Position
8:142438..152563
Genome browser
AA seq
1990 aa
AA seq
DB search
MDNMSNQGQTPNRNPNSHPNPNQNDDQNQTEEQQPAEIEQQHHDEEEAEEEEDDEEEEEE
EEEEGRKEDEELMAKAQALMEKITSSPDNPNPTVLHALASLLETQESLFRCLEENGPSSS
NGRASHNVGQLGNLVRENDEFFDLISSKFLSESRYSTSVQAAAARLLLSCSVTWIYPHVF
EEPVLENIKAWVMNETPRFSIEDHNCKHDLPRNEASDAEILKTYSTGLLAVCLAGGGQVV
EDVLTSGLSAKLMRYLRVRVLGEITACQNDAFHLSESKSLSGAASFRSRDEGRGRVRQVL
ETTHMDDPRLIDEKPLDDHCPERDQERSTSRQSCGDECWVGDRQLSDGVGGGVYMHDVDA
DSEERWHIRDIRDGKLRYGEIDENGRDESSRRRINRGSARSKGKGRTSEGVMENEQSLTS
PGSGSRSGLQQSMRDRNLSKHLDARKVLEAKKFVGKTNADNLVVEREDNDECFQGCKVGS
KDFSDLVKKAVRAAEAEAMAANAPVEAIKAAGEAAAEVVKCAALEEFKTTNNEEAALLAA
SKAAATVVDAANAIEVSRDSTSTGSDPINKSAAETEGNEDVEEYFIPNVEVLAHLKERYC
IQCLETLGEYVEVLGPVLHEKGVDVCLALLQRSSKIEEASKATSLLPDVMKLICALAAHR
KFAALFVDRGGMQKLLAVPRVAQNCFGLSSCLFTIGSLQGIMERVCALPSDVVHQVVELA
IQLLECPQDQVRKNAALFFAAAFVFRAVLDAFDAQDGLQKLLGLLNDAASVRSGANSGSL
GLSGTTSFRNERSPSEVLTSSEKQIAYHACVALRQYFRAHLLLLVDSIRPNKSNRSGVRS
IPSTRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWPAVEKFLGCNGHITMLELCQ
APPVERYLHDLLQYALGVLHIVTLVPISRKMIVNATLSNNRAGIAVILDAANSASSLVDP
EIIQPALNVLINLVCPPPSISNKPSLLAQGQQFASGQTTNAPAVETRNAERNILDRAVFL
PNQSEMRERSGELNLVDRGTAAGTQSTSSIAQTSVSAAASGLVGDRRISLGAGAGCAGLA
AQLEQGYRQAREVVRANNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDETIAH
ILTKLQVGKKLSELIRDSGGLTPGTEQGRWQSELAQVAIELIAIVTNSGRASTLAATDAA
TPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLAETAASLLKEAQLTPLPSLAAP
SSLAHQASVQDTPSTQLQWPSGRTSGGFLSSRSKIAVRDEDINMKCDSTSSLKKKSLVFS
PTFGLQPKNHFYSQDSQPPSVRKTLTSSKSSVSDTQTESMMKSNLDSELHCKTPLVLPMK
RKLSELKDTGLTLSGKRFNTGDHGPRSPVCLTPNSTRRNCLLADAAALTPTSILRDQHVR
ATPSSLIDLSEDNLCGSSNVGQMTPSQVGLLNDPQPSNSERLSLDTIVVQYLKHQHRQCP
APITTLPPLSLLHPHVCPMPKRSLDAPSNITSRLGTREFRSVYGGVHGNRRDRQFVYSRF
KPWRTCRDDAGSLLTCVCFLGDSSHIAVGSHAGELKIFDSNSNNVLDSCTGHQLPVTLVQ
SYFSGETQMVLSSSSQDVRLWDASSFSGGAMHSFEGCKAARFSNSGSIFAALSADSTLRE
ILLYDIQTYQLELKLSDASANSTGRGHVYSLIHFSPSDTMLLWNGVLWDRRVPGPVHRFD
QFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTAITFNARGDVIYAILRRNL
EDVMSAVNTRRVKHPLFAAFRTLDAINYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQ
EEMFSSARVYEIGRRRPTDDDSDPDDAESDEDEDDDDDDDADVDPILGQDLNGDCESDAD
EMSSEDDSVSGLDDDDDDDGDFITDDADFDGGGGILEIVTEGEDDDDDSQLVESFSSGEE
EDFVGNGFGF
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atggataatatgtcgaaccaagggcaaacgcccaatcgcaatcctaattctcatcccaat
cccaatcaaaatgatgatcagaatcaaacggaagagcagcaacctgcagaaatagagcag
caacatcacgacgaagaagaagcagaagaagaggaggacgacgaagaggaggaggaggag
gaagaagaagaaggtaggaaggaagacgaggaattgatggcaaaagcgcaggctctcatg
gaaaagataacttcttctcctgataaccctaatcctaccgtgctccatgctctcgcctcc
cttctagaaactcaggagtctctttttagatgccttgaagagaacggtccttcttccagc
aatggtcgtgcctctcataatgttggacaactggggaacttagtcagggaaaatgatgaa
ttttttgatttgatatcatcgaagtttctttctgagagtagatattcaacctctgtccag
gcagcagctgctagacttcttctaagttgttctgtcacttggatttatcctcatgttttt
gaagaaccagttttggagaacatcaaagcttgggtaatgaatgagactcctagattttct
attgaagatcacaactgcaagcatgacttgccaagaaatgaagcctcggatgctgaaatt
ttgaaaacctattccactggacttcttgctgtgtgtttagcaggtggtggtcaagtggtg
gaagatgtcttgacttctggattgtctgctaagcttatgcgctatcttcgtgtacgagtc
cttggggagattactgcttgccaaaatgatgccttccatttatctgaaagcaagagtcta
tctggtgctgcttctttcagaagcagagatgaaggtcgaggtagggtgcggcaggttcta
gagacaactcatatggatgatcccagactaatagatgagaaacctttagatgaccattgt
cctgaacgggatcaagaacgaagcactagtcggcaatcatgtggagatgagtgttgggtt
ggtgacagacaactatctgatggggtgggagggggggtttacatgcatgatgtggatgct
gatagtgaggaaagatggcatattcgagatattcgtgatggaaaattgagatatggtgaa
attgatgaaaatgggagagatgaatcctccaggcgcaggataaaccgtggttctgcaagg
tcaaagggtaagggaaggacttccgaaggggtcatggagaatgaacaatcactaacctca
ccaggctctggaagtcgttctggactgcaacagagcatgagagacagaaatttgtctaag
catttagatgccagaaaggtgctggaggcaaagaagtttgtgggaaagactaatgctgat
aatctggtagtggaaagagaggacaatgatgaatgctttcaaggatgcaaagttggaagt
aaagatttctctgatctggttaaaaaagctgttagagctgctgaagctgaagcaatggca
gctaatgcacctgttgaagccatcaaagcagctggtgaagctgcagctgaagttgtcaag
tgtgctgctttagaggagttcaaaactactaacaatgaagaagctgcattgttggctgca
tccaaagcagcagctacagttgttgatgctgctaatgccattgaagtctcaagggactcc
actagcacaggttctgatccaataaataaaagtgctgcagaaacagaaggaaacgaggat
gttgaggagtattttattcccaatgttgaggtacttgcacatttgaaagaaagatactgt
attcagtgccttgagactttaggtgaatatgttgaagtcctcgggcctgtactgcacgaa
aagggcgtagatgtctgtctagccctgttgcaacgaagttccaagattgaagaagcatca
aaggctacttctctcttacctgatgtgatgaagctgatttgcgctttagcagcccatcgg
aagtttgctgcattgtttgttgatcggggtggcatgcaaaaactgctcgctgttccaaga
gtggctcaaaattgttttggtctttcttcttgcttatttaccataggttccctacaggga
ataatggaacgtgtatgtgcacttccttctgatgttgttcaccaagtggttgagctagct
atccaacttcttgaatgtccgcaggatcaagttaggaaaaatgcagcactattttttgct
gctgcatttgtcttcagagcggtgcttgatgcttttgatgctcaggatggcttgcagaaa
ttattgggccttttaaatgatgctgcctcggtaagatctggggcaaattctggctcatta
ggcttgtccggaacaacatcatttcgaaatgagagatcaccgtcagaggtactgacatcc
tcagaaaagcagatagcttatcatgcatgtgttgctttgcggcaatacttcagagctcat
cttctgctgcttgtggattccatacgcccaaataaaagtaaccggagtggggtgcggagt
attccaagcaccagagcagcatacaagccacttgatattagtaatgaggctatggatgct
gtgtttctgcagttgcagaaggaccggaagctgggtcctgcttttgtgaggacccggtgg
cctgctgttgagaagttcttaggctgtaatggacatattaccatgttggaattgtgtcag
gctccacctgttgagcgttacctacatgacttgttacagtatgcattaggtgttctgcac
attgttactttggtgcctataagccgcaagatgattgtaaatgccactttgagcaataat
cgtgctggtatagcggttattttggatgcagcaaatagtgctagtagtctcgtggaccct
gagattatacagccagctcttaatgtgttaattaacctagtttgtcctccaccttcaatc
agcaataaaccatcattactagctcaaggtcagcagtttgcttctggtcaaaccacaaat
gctcctgctgtggaaactagaaatgcagaacgtaatattttggatcgagctgttttcctg
cctaatcagagtgagatgagggaacgaagtggagagttgaatttggtagatagaggcact
gcagcaggcacccaatccaccagcagtattgctcaaacatctgtttctgctgctgcatct
ggtttggttggagatcggagaatatctttaggtgctggagcaggttgtgctggccttgct
gcacaattagaacaaggatatcgtcaagcaagagaggttgtccgtgccaataatggcata
aaggttctactgcatctcctccaaccccgtatatattcacctcctgctgctttggattgt
cttcgggcccttgcatgccgagtcttgcttggtttagctagagatgagacaattgcacat
atattgaccaagcttcaggttggcaagaagctatcagaactgattcgagattcaggtggc
ctgacacctggaactgaacaaggcaggtggcaatctgaacttgctcaggtggcaattgag
ctaattgctattgttacaaattctgggcgtgctagtacattggctgctacagatgctgct
acacctacattgagacgcatagagagagctgctattgctgctgcgactcctattacttac
cattccagggagcttttgcttctcatacatgaacatcttcaggcatctggtcttgctgaa
actgctgcttcacttctgaaagaagctcaattgacacctttgccatccttggctgcccct
tcatctcttgcccaccaagcctctgtgcaagatacaccttcaacacaactccagtggccc
tcaggtcgtacctctggtggatttctctccagcagatccaagattgctgtacgagatgag
gatattaatatgaagtgtgattcaacttcatctttaaagaagaaatcacttgttttctct
cccacttttggattacaaccaaaaaatcacttctattctcaagattcccaacctccatct
gtcaggaaaacactcaccagttcaaaatcaagtgtttctgatactcagactgaatctatg
atgaaaagtaaccttgattcagaattgcactgtaagactcctcttgtgttgcctatgaaa
agaaagttatctgagttaaaggatactggtttgacattatcagggaagcggttcaacact
ggtgatcatggaccgaggtctccggtttgtctgacacccaattctactcgaagaaactgt
ctgcttgctgatgctgctgcattgacgccaacttctattttaagggatcagcatgttcga
gcaacaccaagcagcttaattgatttgtcagaggacaacctatgtggtagttctaatgtg
ggacagatgacgccttcccaagttggacttctaaatgatccccaacccagcaactcagaa
cgtttaagtctagacactatagttgttcagtatctaaagcaccagcatcgtcagtgccct
gctcctataacaacccttccaccactttctcttttgcatccacatgtttgtcctatgccg
aagagaagccttgatgcaccatcaaacatcacttcccgacttggtactcgtgagttcagg
agtgtttatggcggagtccatggaaatcgtagagatcgtcagtttgtttacagtagattc
aagccatggagaacttgcagggatgatgctggcagtttgttgacatgtgtctgttttctg
ggggactcctcccatattgcagttggcagccatgctggggagctaaaaatttttgattct
aacagcaataatgtactggacagctgcacaggccaccagcttcctgtgactcttgttcag
tcatatttttctggtgagacccaaatggttctatcatcaagctctcaggatgtgcggttg
tgggatgcctcttctttctcaggtggggctatgcattcatttgaaggctgcaaggctgct
aggttcagcaattctgggagcatttttgctgccctatctgctgattctaccctgcgagag
attctcctttatgatatccagacctatcagttggaattgaagctttctgatgcatcagct
aattctacgggtcgaggtcatgtatattctcttatacattttagcccatctgacactatg
ctgctttggaatggtgttttatgggatcggcgggttccaggtccggttcatcgctttgat
cagtttacagattatggtggtggtggtttccatcctgctgggaatgaggttatcataaat
tctgaggtttgggatttgcggaagttcagactactacgaagtgtaccttctttagatcaa
acagcaataaccttcaatgcacgtggggatgtaatttatgctatcctgaggagaaatctt
gaagatgtgatgtcagcagttaatacccgtcgcgtgaaacatcctttatttgctgctttc
cgcacattagatgccattaactactctgatattgcaactattccagtggatcgatgtgtt
cttgactttgcaactgaaccaacagattcctttgttgggttgattacaatggatgaccaa
gaagagatgttttcatcagccagggtttatgaaattggtcgccgaaggccgactgatgat
gattctgatcctgatgatgcagaaagtgacgaggacgaggatgatgatgacgatgatgat
gctgatgtagacccaatacttgggcaagatctcaatggtgattgtgagagtgatgcagac
gaaatgagcagtgaggatgatagcgtgagtggtcttgatgatgatgatgatgatgatggg
gattttattacagatgatgcagacttcgatggtggaggtgggatattggagattgtgact
gagggtgaggatgatgatgatgacagccagttggttgaatcttttagcagtggtgaagaa
gaggattttgtggggaatggttttggtttctaa
DBGET
integrated database retrieval system
