Gossypium arboreum (tree cotton): 108453041
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Entry
108453041 CDS
T05776
Name
(RefSeq) DNA topoisomerase 1 beta-like isoform X2
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gab03032
]
108453041
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108453041
DNA replication proteins [BR:
gab03032
]
Eukaryotic type
DNA Topoisomerases
108453041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
108453041
NCBI-ProteinID:
XP_017606412
UniProt:
A0A0B0P7A8
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All DBs
Position
5:complement(91934725..91941223)
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AA seq
903 aa
AA seq
DB search
MAVEAPSKHVFDYDDEDDDGPVVFKRSNTSSSKQNQLNSEVKKASSQRSDGQSGRQASSV
RAPNGQNSVAQTNKSIPPSKSPPIRSPILSPKSSNSSSKASPVRSPVVSSKASTSFNDQS
KQASKQNKFTAVKEEKSPIKRTDETNSDDDDDDDSKPLSARLKGISSQGNKGVSTSTPAQ
SQRFVPKIEVKGSAEDPDDDAPLSARFSTKSNTGTSSSKPYGSHEKKPLASKIQQNGSIM
KVKQQKSSMLSDKRPLDKGNSSDQSYAKKPKISDTPTMMKTKQVTVKAEKDDEDDHIPIS
QRIKKSVSSVSKASSVKQKATKVVSSSFKKINKKSKKDMKKSKYSKSTKLSPSSGDGQKK
WSTLVHNGVIFPPPYKPHGVKMLYDGRPVDLTPEQEEVATMFAVMQETDYMSKPQFKKNF
WEDWSKLLGRNHVIKSLDKCDFTPIYEWHLQEKEKKKQMSSEEKKALKEEKLMQEEKYMW
AIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPCDITINIGKDAPIPECPIPGE
RWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARLLKDYIKNIR
AAYTKDFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNK
LKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLFDELDTSKLNAHLKELMPGL
TAKVFRTFNASITLDDMLNKETKDGDVAEKVVIYQRANKEVAIICNHQRSISKSHSAQMS
RLTEKINELKGLVKELKTDLDRAKKGKPPLKDADGKQKRNLTPEAIEKKIAQTNVKIEKM
ERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPD
FRF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgaggctccttccaaacatgtttttgattatgatgatgaggatgacgatggg
cccgtagttttcaagaggagtaatacctcgtcctctaagcaaaatcagttaaactcggaa
gtaaagaaggcatcatctcaaaggtctgacggacagtctggcagacaggcctccagtgta
cgagctcctaatggtcaaaattctgttgcccagaccaacaagtcaatcccgccgtctaag
tcacctcccatcagatcacctattttgagcccgaaatcatctaattcatcctccaaggca
tcaccagtgaggtcaccagtggttagttctaaggcatcgacttcattcaatgatcagtca
aaacaagcatcgaagcagaataagtttactgctgtcaaggaagagaaaagcccgattaaa
cgtactgatgaaacaaacagcgacgacgacgacgacgatgactcaaaacctttgagtgca
aggcttaaggggatctcaagccagggcaataaaggggtgagcacttcaactcctgcccag
tcacagcgatttgtaccaaagattgaggtaaaaggatctgctgaagatccagatgatgat
gctcctttgtctgcgaggttcagcacaaagtctaatactgggacatcgagcagtaagcca
tatggatctcatgagaagaaacctctggcttctaaaattcagcagaatggttctatcatg
aaggtcaagcagcaaaagtcttccatgttgtcagataagagacctcttgataaaggcaat
tcatcagatcagtcttatgctaagaagccaaagatttcagatactcctacaatgatgaaa
accaagcaagttactgtgaaagcagaaaaagatgatgaagatgatcatattccaatttcc
caacggataaaaaagtcggtttcatcagtcagcaaagcatcgtccgtgaagcaaaaggca
accaaggttgtatcttcatcatttaaaaagataaataagaagtcgaagaaagatatgaaa
aaatctaaatatagcaagtcaacaaagctgtcacctagttctggtgatggacagaaaaaa
tggagtaccttggttcacaatggtgtcatattccctcctccatacaagcctcatggggtt
aagatgctatatgatgggcgaccagtggatctaactcctgaacaagaggaggtggcaaca
atgtttgcggtaatgcaagagactgattacatgagtaaaccacagttcaagaagaatttc
tgggaggattggagtaaattactggggagaaaccatgtcattaagagcttggacaaatgt
gatttcactccaatctatgagtggcatttgcaggagaaagagaagaagaagcaaatgagt
tctgaagagaagaaggctttgaaagaagaaaaattgatgcaggaggaaaagtatatgtgg
gctattgtagatggtgtcaaagagaaggtaggaaatttcagagttgaaccacctggactt
ttccgaggtcgaggagagcatcccaagatgggaaagttgaaaagacgtattcgtccatgt
gacattactattaatatcggaaaggatgccccaattccagagtgtccaatccctggtgaa
agatggaaagatattaaacatgacaatactgttacatggttagctttctggaatgatccc
attaatccaaaagaattcaaatatgtatttttggctgctagcagttctttgaaagggcaa
agtgacaaggagaaatatgagaaagcaaggctgctgaaggactatatcaagaacatcaga
gcagcatatacaaaggattttacagcgaaagatgttacaaaaaggcaaatagcggtcgct
acctatctaattgacaaattagctcttagggcgggaaatgagaaggatgatgatgaagct
gataccgttggttgctgcacgcttaaagtaggaaatgtggaatgtattcctccaaataaa
ttgaagttcgatttcctcggtaaagattcgatccaatacgtgaacacagtagaggttgag
cttcctgtatacaaggcaattggacagtttcaaactgggaaaagcaaaagtgatgatctt
tttgatgagcttgatacgagtaaactaaatgctcatttgaaggaactcatgcctggtctt
acagcgaaagtcttccgtacctttaatgcttccattacattggacgatatgttaaataaa
gaaaccaaagatggggatgtagcagaaaaagtagtaatttatcagcgtgcaaacaaggag
gttgcaatcatttgtaatcatcagcgcagtatctcgaaatctcatagtgcgcaaatgtca
aggctgactgagaaaataaatgagctcaagggtcttgtaaaagagctaaaaactgatttg
gacagggctaagaaagggaagccgccattgaaggatgctgatgggaagcagaagaggaac
ttgacccctgaagcgatagagaaaaagatagctcaaacaaatgtaaagatcgagaagatg
gaacgggacatgcagactaaagaggatctaaaaactgtagcattgggcacatccaaaatc
aattaccttgaccctcgaatcacggttgcatggtgcaagcggcacgaagttcccatcgag
aagatattcaacaagtcacttctggcaaagtttgcttgggcaatggatgtggatccggat
ttcagattctaa
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