Gossypium arboreum (tree cotton): 108453048
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Entry
108453048 CDS
T05776
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108453048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108453048
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108453048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108453048
NCBI-ProteinID:
XP_052887616
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Position
8:116110610..116123585
Genome browser
AA seq
1833 aa
AA seq
DB search
MSSRLEICEENEGEHVETQDFFFEKIGEPVPVKSQPDSQFDLRSPPSQPLVLSQRFQLLF
LAHSSGGFLVARTKDVIDLAKDIREKASSSSIEDLSLVEVPIGKVHILALSTIDDTILAV
SVAADIHFFSVSSLLNKDIKPCFSTSLPQSSFVKDIRWRKKKDNSFLVLSDDRKLYHGTL
AHPLKHVMDNVDAVEWSAKGAFVAVAKDNSLSILSSKFNEKLCVALSFKSWVGDSNDDCT
VKVDTIRWIHPDCIILGCFQFTRDAKEENYLVQVVKSKSGKITDATSNLVVLSFSDLFAG
LIDDIVPFGTGPYLYLSYLEQSKLAIAANRKNTDQHIVLLSWSLGETGEASVVDIERDNW
LPRIELQDNDDDNLIMGLCIDNVSVCGSVKVQLGVEEVRELSPCCVLICLTLEGKLIMFQ
IASARENDVPPDVSALSDKEEDTPAVVSAEMDPPELTYGEGEQKSELVALSLPLMDKGKT
ELLTNGSSDVNLSQMNVNSVTHATDKLFHNDDIKTAVSLKNSQSSEAVGQQKPPTSMLYQ
EAGTQQKLFFGGQGTNSGQSFLRTSQLEGPGNKVRDGSQTEAQKIPGFGSVTPVAKVSND
SLLQPSHESIPKKFELVKEPVGEAGSIGLQSTSVKLWPNPSSQPFSSGKFMVSKESDARA
SFSSPSNFQYNSSQSTRGATSIPGSNVEKPSHLKDTTGISVSVNKISGTPVDIGAQKFSL
GAGNIESVPLIRGSQSSSLLNFAMEKSFNQKLHPSKDEYKSAIQSRMLKLEPQLLKQFGN
IKEMAKELDTLLESIEEAGGFRDVCTVFQRSSVEELEHGIAVLSKKCRSWKNVMDEQLGK
IQQHLDKTIQVLARKIYIEGIIKQASDRQYWDLWNCQKLSSELELKQRHILKLNQDLTNQ
LIELERHFNTRELHKFGDDDGVRDGRRTFQSRFGPSRHVLSLHSLHSTMSSQLAAAEQLS
ECLSEQMAILSVQSPVKKQNVKEELFQMIGIAHDASFTSPHATKPSNKSKKLVISSGSSA
SRNQSRRNQSCALKSSDPEYSRRSRESLDQSWATFEPPKTTVKRMLLQESANVKRSLLTD
KQNFSPYASEESTSLFSKELKATSTTLHQSGNEVKTKIQDALPRQESETTVFRWANNSSL
LPPNYAGWKSSTVQTSNFNALPSASGSQPMLVQNSSGETRSIPVAKLNSGASQVERSNIS
SFNENEIQSTLQFRPNLHQESSISQVASLPKKSTDILNSDGKGIVLANSALGDVKHVSST
TKSTLFGSSNDNNSQFIPPAAVSASSAPSAKVSQFNVVTSKIQPSEKVSQSFAFSKPVED
SSSSIFSSSSRSFSSSFSTMTASSLTSVNVLSTETSATSAPKFSFSTSFSAVPTSPAAQS
SEPSSVVAVDANRKASSFSPSSVPFSAFVSSSDSLSIQPLKMPVPLPADLSPVSSSEILK
VEAQPHKEIHDLKKDGDPIIQAPPLQHELPATELSLKPKFAVSSPKKSETPTGVLSGSQT
SIIDLASPATNLALNPQPPRPSTGDSLSAPSSISINTTNGKSRSLDLTQEDEMEEEAPET
NQMTELGLGSLSSSGIGSTPNPTAPKPNPFGAPFGVVATSAATSSFTSTVNPGELFRPAS
FSFQSPQPSQSAQPASFGTFSGGFASGAPGQAPAQCAFGQPAQLGAGQQALGSVLGAFGQ
SRQLGTALPGSSFASGSGFGGGFASPQSAAGFSNAATGGGFAGLASGGGGFSGVASGGGF
GVPASGGGGFGSLASGGVAGSASCGGGFAGAAAGGTGGFAAPASGGGFAGAAGSGSGGFG
VFSSQQRNAGFSAFGGGGGQTGKPPELFTQMRK
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccggcttgaaatttgtgaagagaatgaaggggagcatgtcgaaacccaggat
ttcttcttcgagaaaatcggcgaacccgttcctgtcaaatctcaaccggattcccagttc
gatctccgaagtcctccttctcagccccttgtcctctcccaacgtttccaactcctgttt
ctagctcattcttctggggggttcttggtggcgaggaccaaggatgtgattgatttagcc
aaggacattagggaaaaagcctcctcttcaagtattgaagatctgagtttggtggaagtt
cccattggcaaggttcacattcttgctctttccaccatcgacgacaccatacttgcagtt
tctgtggcagctgatattcatttcttcagtgtcagctcccttcttaataaggacataaag
ccatgtttctccacttcgctccctcagtcaagctttgtcaaggatattcgttggagaaag
aagaaggataactctttcctagttctttcagatgatagaaagctatatcatggaactctt
gcacatcctcttaagcatgtgatggataatgttgatgctgttgaatggagtgcaaaaggt
gcttttgttgccgtggccaaagataatagccttagtattttgtcatccaaattcaatgaa
aaattgtgcgtagctctttcattcaagtcttgggttggtgattccaacgatgattgcact
gtaaaagtggataccatcagatggattcatcctgattgcattattcttggatgctttcag
tttaccagagatgcgaaagaagaaaattacctcgtccaagtagtcaaaagcaagtcaggc
aaaatcacagatgctacttccaatttggttgttctatcctttagtgatttgtttgctggt
ctaattgatgatattgtgcccttcggaaccggcccttacttatacttgagttatttggaa
caaagcaagcttgcaattgctgctaacagaaagaacacggatcagcatattgtgttactc
agttggtcacttggtgagactggtgaagcttcagttgttgatattgagcgtgataattgg
ctccccaggattgaacttcaagataatgatgatgataatttgatcatggggctttgcatt
gataacgtgtctgtgtgtgggagtgttaaagtgcaacttggagttgaagaagttagggag
ctttcaccatgttgtgttcttatatgccttactttagagggcaaacttattatgttccag
attgcaagtgccagggaaaatgatgttccacctgatgtttctgccctttctgataaagaa
gaggatacccctgctgtggtgtctgctgaaatggatccacctgaacttacatatggagag
ggtgaacaaaagtcagaactggtagctttgtctcttccattgatggataaaggcaaaact
gagcttctcaccaatggaagtagtgatgtaaacctttctcaaatgaatgtgaattcagtt
acacatgctactgataaactattccataatgatgatattaaaacagcagtgtccttgaag
aactcccagtcttcggaagctgtgggccaacaaaaacctccaacctcaatgctgtaccaa
gaagcaggtactcaacaaaaattgttttttggagggcaaggtaccaattcaggacaatca
tttctgaggacttctcaattagagggacctggtaacaaggtgagggatggtagtcaaaca
gaagctcaaaaaattccaggatttggatctgttactcctgtggcgaaagtttcaaatgac
tccttattacaaccaagccatgagagcataccaaaaaagtttgagctggttaaggaacca
gtaggtgaagctggatcaattggtttgcagagtacatctgttaagttgtggccaaatcca
tcatcccagccattttcaagtggaaaattcatggtttcaaaggagtctgatgccagagct
tcattttcatctccaagtaattttcagtataatagttctcagagtaccagaggtgctaca
agcattcctggtagcaacgttgaaaaaccttcacatctaaaagatactactggtatatca
gtttctgtcaataaaatttcaggtacaccagtagatattggggcccagaaattttcatta
ggggcaggaaatattgagtcagtacctttaattcgtggctcacagtcatcctccctacta
aattttgcaatggaaaagtctttcaaccaaaagcttcatccctccaaggatgagtataaa
tctgcaatccagtcaaggatgttgaaattggaaccacagttattgaaacaattcggcaat
attaaagagatggcgaaagaactagacacacttctggaatctatagaagaagctggtggc
tttagggatgtttgcactgtttttcagagaagttcagttgaagagctggagcatggcata
gcagttctttctaaaaaatgcaggagttggaagaatgtaatggatgagcagcttgggaag
atccaacaacatcttgataaaaccatacaagttttagcaaggaaaatatacatagaaggc
attattaaacaagcttcagataggcaatactgggacctgtggaattgccaaaagttgagt
tctgagcttgagcttaagcagcgacatatattgaaattgaatcaagatttgaccaatcag
ttaatcgaattagagaggcatttcaacaccagggagcttcataaatttggtgatgatgat
ggagttcgtgatggtcggagaacttttcagagtagatttgggccttcaagacatgttctg
tccctgcattctttacatagcacaatgagttcacaactagcagctgctgagcaactttct
gaatgtctctcggaacaaatggctatactgagtgtacagtcccctgtgaaaaaacagaat
gttaaggaggagttgtttcaaatgattggaatagctcatgatgcctctttcacctctccg
catgctacaaaacctagcaataagtctaagaaacttgttatttcctctgggtcctctgct
tctagaaatcagtcgaggagaaaccaatcctgtgctctgaagagttctgatccagaatat
tctaggaggagtagggaatcattggatcagagctgggctacttttgagcctccaaaaaca
actgtaaaaaggatgcttttgcaagaatcagcaaatgtaaaaagatcacttttaaccgat
aaacagaactttagcccttacgcctccgaggagtcgacaagtttattctcaaaggaactc
aaagcaacttcaaccacgttgcatcaatctggaaatgaagttaaaacaaaaattcaggat
gcattaccgagacaggaatctgaaacaactgttttccgatgggctaataatagttctcta
ttaccaccaaattatgctgggtggaaatcttctactgtgcaaacaagtaacttcaatgct
ctgccatcagcatcaggatcacaacctatgttggtgcagaattcttctggggaaacacgc
agtatccctgttgctaaactaaactccggagcttctcaggttgagagatctaatatatca
tctttcaatgagaatgaaatccaatccactctacagtttagacctaatctacatcaagag
tcttcaatctcccaggtggcttcattgccaaagaaatctactgacatcttaaattcggat
ggtaaagggattgtgcttgctaattcagcgctgggggatgtgaaacatgtgtcatctacc
acaaagagtacattatttggttcttctaatgataacaactctcagttcatacctcctgct
gctgtttctgcatcttctgccccatcagccaaagtttcacaattcaatgttgtgacaagc
aaaatccagccaagtgaaaaggtatcacagtcgtttgcattctctaaacctgttgaagat
tcgtcatcttcaatattcagttcctcaagtcgatcattttcatcatcattttcaactatg
acagcctcatcactcacatcagttaatgtcttatctaccgaaactagtgcaacatcagca
ccaaaattttccttttcaacttcattttctgcagtgcctacttcacctgcagcacaatct
agtgaaccaagttctgtagttgcagtagatgctaatagaaaagcttcatctttctcacca
tcatcagttcctttctctgcttttgtttcctcttctgattccttgtctattcagcctctt
aaaatgcctgtaccgttgcctgctgatttatctcccgtgagttcttctgagattttaaaa
gttgaggcccaaccacataaggaaatacatgacttaaaaaaggatggggatccgattata
caggcaccacctctgcaacatgaacttccagcaacagaattgagcttgaagcctaagttt
gctgtctcatcaccaaagaaaagtgaaactcctactggagtgctatctggaagccaaacc
agcatcattgatcttgcaagtcctgcaactaatttggcattaaatcctcagccaccgcgg
ccttctactggagatagtctttcagctccttcgtcaattagtattaataccacaaatgga
aaaagcagaagtttggatctcacacaagaggatgagatggaggaggaggctcctgagaca
aaccaaatgactgaacttggcttgggaagcttaagtagctctgggattggctcaacccct
aacccaactgctcctaagccaaacccatttggtgctccattcggagttgtggctacaagt
gcagctacctcttcattcacctcaacagttaatcctggagagttgtttaggcctgcatct
tttagcttccaatctccacagccttcccaatcagctcaacctgcaagtttcggtacattt
tctggtggctttgcttctggagcccctggtcaggctcctgctcaatgtgctttcggccaa
ccagcacagcttggagctggacagcaggctttgggatcagttcttggtgcttttggccag
tcaaggcagcttggtactgctctaccaggaagtagttttgcttcggggagtggttttggt
ggtggttttgcaagtcctcaatctgctgctggattttctaatgctgcgacaggaggtggg
tttgctggtttggcttcaggtggtggtgggttttctggggttgcttcaggtggtggattt
ggtgttccagcttcaggcggtgggggatttggtagcttagctagtggaggagttgcaggt
tctgcctcatgtggtggtggatttgctggagcagctgctggtggtactggaggatttgct
gctcctgcctcaggtggtggtttcgcaggagctgctggctcagggagtggtgggtttggc
gttttcagcagccaacaaagaaatgctggtttctcagcctttggaggtggcggaggacaa
actggaaaacctcctgagcttttcacacagatgagaaaatag
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integrated database retrieval system
