Gossypium arboreum (tree cotton): 108453061
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Entry
108453061 CDS
T05776
Name
(RefSeq) aconitate hydratase, cytoplasmic isoform X1
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00020
Citrate cycle (TCA cycle)
gab00630
Glyoxylate and dicarboxylate metabolism
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
gab01200
Carbon metabolism
gab01210
2-Oxocarboxylic acid metabolism
gab01230
Biosynthesis of amino acids
Module
gab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gab_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
gab_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
108453061
00630 Glyoxylate and dicarboxylate metabolism
108453061
Enzymes [BR:
gab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
108453061
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
HypD
Acyl_transf_2
Motif
Other DBs
NCBI-GeneID:
108453061
NCBI-ProteinID:
XP_017606445
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All DBs
Position
5:43656920..43665772
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AA seq
989 aa
AA seq
DB search
MAVSSSASSSLLRAASSYSRTRFFHSSFRNLSPSSPSLLNHQRSLASAAVRSFHCSPRWS
HRLDWRSPFSLRAQVRAVNPVIERLERKFSTMAAEHPFKAVLTSLPKPGGGEFGKFYSLP
ALNDPRIDKLPYSIRILLESAVRNCDNFQVKKEDVEKIIDWQNTSPKQVEIPFKPARVLL
QDFTGVPAVVDLACMRDAMHKLGSDTNKINPLVPVDLVIDHSVQVDVTRSENAVQANMEL
EFQRNKERFSFLKWGSTAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTNGVLYPDSVVGTD
SHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLFGKLRNGVTATDLVLTVT
QILRKHGVVGKFVEFYGDGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGR
SDETVAMIESYLRANKMFVDYNEPQQERVYSSYLELNLAEVEPCISGPKRPHDRVPLREM
KSDWNSCLNNKAGFKGFAVPKEAQDKVAKFSFHGQPAELRHGSVVIAAITSCTNTSNPSV
MLGAGLVAKTACELGLQVKPWIKTSLAPGSGVVTKYLLQSGLQEYLNKQGFHIVGYGCTT
CIGNSGELDESVASAISENDIVASAVLSGNRNFEGRVHALTRANYLASPPLVVAYALAGT
VDIDFDKEPIGTGKDGKSVYFKDIWPSTEEIAEAVQSSVLPEMFKSTYEAITKGNPMWNQ
LSVPSSTMYSWDPNSTYIHEPPYFKNMTMEPPGAHGVKDAYCLLNFGDSITTDHISPAGS
IHKDSPAAKFLLDRGVERKDFNSYGSRRGNDEVMARGTFANIRLVNKLLNGEVGPKTVHV
PTGEKLYVFDAAMRYKDAGYDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIH
RSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPSKITDIRPGQDVTVTTDNGKSFTC
TVRFDTEVELAYFNNGGILPYVIRNLIKQ
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctcatcttcagcttcttcctctctcttaagggcagcgtcttcatactctcga
actcggttctttcattcttcgtttcggaatctcagtccaagctctccttcgcttctcaat
caccaacgatctcttgcctccgccgccgttcgttccttccattgctctccgcgatggagc
caccgtctcgattggagatctccttttagccttcgtgctcaggtcagagctgttaatcca
gtcatcgaacggcttgagaggaagttttccactatggctgctgaacatccttttaaggca
gtcctgaccagtcttccaaagccaggtggtggcgagtttggaaagttctatagcttgcct
gccctgaatgatccgaggattgataaactgccctactctatcagaatcctgcttgaatct
gcggttcgtaactgtgacaacttccaagtcaagaaggaggatgttgagaaaattattgat
tggcaaaatacatcaccaaagcaagtagaaatccccttcaagccagctcgtgtgctcttg
caggatttcactggagtgcctgctgtggtcgaccttgcttgtatgcgtgatgctatgcac
aagcttggcagtgatacaaacaagattaatcctttggttccggtagatcttgtcattgat
cattcagttcaagttgatgtaacaagatcagaaaatgcagtgcaagcaaacatggaactt
gagtttcagaggaacaaggaaaggttttctttccttaaatggggatctactgccttccat
aatatgcttgttgttcctcccggttctggtattgtgcatcaggttaatctggaatatctt
ggacgagttgttttcaacaccaacggcgtgctttaccctgatagcgtggttggaactgat
tcccatacaactatgatagatggtcttggagtagctggctggggagttggtggtattgaa
gctgaggcagccatgcttggtcagcctatgagcatggttttgcctggtgttgttggattc
aagttatttggaaaattaagaaatggtgtgacagctacagacttggttctaactgtgaca
caaatactgaggaagcacggtgttgttggcaaattcgttgagttttatggggacggtatg
agtgaactttcattggctgacagggctaccattgctaatatgtctcctgagtatggtgca
accatgggattcttccctgtagatcatgttactttgcagtatctgaaattgactggccga
agtgacgaaactgtggcaatgatagaatcatatctccgtgcaaataaaatgttcgtcgac
tacaatgagccccaacaagaaagagtgtactcatcatatctagaattaaaccttgctgaa
gttgaaccctgtatatctggaccaaagagaccacatgatcgggttcctttgagagaaatg
aagagtgattggaattcttgtcttaataataaagctggtttcaagggctttgctgtgcca
aaagaggcacaggacaaagtggcaaaattttcgttccacggacagccagcagagctcagg
catggcagtgttgtaattgctgctattacgagctgcaccaatacatcaaatcctagtgtc
atgcttggggcaggacttgttgcaaaaacggcttgtgaacttggtttacaggtcaagcct
tggataaagacaagtcttgcaccaggttcaggagttgttacaaaatatttactgcagagt
gggttgcaagaatatttgaataagcagggcttccatattgttggatatggctgcacaact
tgtattggaaattcaggagaattggatgaatcagttgcctctgctatttcagaaaacgac
attgtagcgtctgctgtactttctgggaaccggaattttgagggtcgtgttcatgcctta
acaagagccaactaccttgcttcacctcctttagtggttgcatatgcccttgctggcacg
gttgatattgactttgacaaggagccaattggaactgggaaggatggtaagagtgtctat
ttcaaggacatctggccttctactgaagaaattgcagaggctgtccaatccagtgtcttg
ccagagatgttcaaaagtacttacgaggctattacaaagggcaatcccatgtggaatcag
ctatcagtgccttcttccactatgtactcatgggaccccaactcaacctacattcatgag
cctccatacttcaagaacatgaccatggagcctcctggagcccatggcgtgaaagatgct
tactgcttattgaactttggtgacagtatcacaacagatcacatttctcctgcaggaagt
atccataaagacagtcctgctgcaaaattcctacttgaccgtggggtggagcgcaaggac
ttcaactcttatggaagtcgtcgcggtaacgatgaagtgatggcacgtggaacttttgct
aacattcgccttgtgaacaagctgttgaatggggaagttggcccaaaaacggtacatgtc
cctacaggagagaaactctatgtatttgatgcagcaatgaggtacaaggatgcaggatat
gacaccattgttttggctggagctgaatatggaagtggtagctcccgagattgggctgca
aaaggtccaatgctattgggagtaaaagcagtaattgccaaaagttttgagagaatccat
cgaagtaatttggtaggcatgggcatcattccactttgttttaagtctggggaggatgcc
gacacactaggtttaaccggtcatgagcgttataccatagatctcccaagcaaaataacc
gatataagacccggtcaagatgtgactgtcacgacggataatgggaagtctttcacctgc
actgtccgcttcgacactgaggttgaattggcctacttcaacaatggcggcatacttcca
tatgttattagaaacctgattaagcaataa
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