Gossypium arboreum (tree cotton): 108453065
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Entry
108453065 CDS
T05776
Name
(RefSeq) ABC transporter G family member 39-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108453065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108453065
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108453065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC_trans_N
AAA_21
AAA_16
AAA_23
SMC_N
AAA_29
AAA_22
Rad17
AAA_30
TsaE
AAA_18
AAA
RsgA_GTPase
AAA_33
AAA_25
NACHT
ABC2_membrane_3
T2SSE
nSTAND3
ABC_ATPase
AAA_11
AAA_17
AAA_28
ATP_bind_1
DO-GTPase1
AAA_5
RuvB_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
108453065
NCBI-ProteinID:
XP_017606450
LinkDB
All DBs
Position
5:complement(9173846..9182058)
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AA seq
1452 aa
AA seq
DB search
MASALAGDDLSARSMSSGRGGWGSARFRDIWQTPPEVFERSQRHDTEEDLMWAAIERLPM
YDRLRKSMIRNVGDNGKVVLHEVDVTKLGQQNKKQLLDSILKVVEQDNETFLRKLRDRTD
RVGIEIPKIEVRFEHLSVEGDVYVGSRALPSLFNVTLTIIESILGLVRLVPSRKRKIEIL
KDVSGIVKPSRMTLVLGPPGAGKTTFLQALAGRLDQDLRSSGRITYCGYEMSEFIPQRTC
AYIGHHDVHHGEMTVRETLDFSGRCLGVGTRYEILKELSKREKEAGIKPDPEIDAFMKAT
AMAGQRTSLVTDYVLKILGLEMCSDTLVGDDMRRGISGGEKKRLTTGEMLVGPAKAFFMD
EISTGLDSSTTYQICKFMRQMVHILDVTMVISLLQPAPETYDQFDHLILLSEGQIVYQGP
TQGVLEFFEYMGFKCPERKGVADFLQEVTSKKDQEQYWFRKDQPYSYVTVSEFVQGFNSF
HIGQQLESDLRVPYDRSVARHPALVTENYGISNWELFRACFAREWLLMKRNSFVYVFKTV
QITIMSLIAMTVFFRKEMHAGNLEDGSKFFGALFYSLINVMFNGMAELAMTIFRLPVFYK
QRDFLFYPPWAFSLPIWIIKIPFSLMESGIWICLTYYTIGFAPAASRFFRQFLAFFGIHQ
MALSLFRFIAAVGRTQVIANTLGTFTLLMVFVLGGFIVARDDIEPWMIWGYYLSPMMYGQ
NAIVMNEFLDKRWNTQNNDTRINATTVGQVLLKSRGFYTEDRWFWISVAALFGFSVLFNI
LFIVALTYLNPLRDSKAIVVDENENTNKKESSSGKNIPGTDLPVRNSSDATNITDRPTGR
GMVLPFKPLSLAFNHVSYSVDMPSEMKSQGVEEDHLKLLRDVSGAIRPGILTALVGVTGA
GKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFTRVSGYCEQNDIHSPHVTVYESLLYS
AWLRLSSEVDTKTRKMFIEEVMELIELKPLRDAIVGLPGVDGLSTEQRKRLTIAVELVAN
PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGG
QIIYAGPLGRNSHNLVQYFEAIPGVPKIKEGYNPATWMLEITAPAVENQLNADFAEIYAE
SSLYQRNQELIEELSHPVPGSEDLHFPTKYSLPFLSQCKVCFLKQHWSYKRNPRYNAIRF
FTTIVVGILFGLIFWNKGQQIAKQQDVLNFFGAMYSAVFFLGAVNATTVQGVVAIERTVF
YRERAAGMYSELPYALAQVAIEIIYTAIQTAIYVALLYSMIGYEWKASNFLWFYYFITAS
FVYFTLYGMMVIALTPGAQVAAIVMSFFLSLWNIFSGFLIPRPRIPVWWRWYYWVTPVAW
TLYGLITSQLGDRNSDLEVPGFPDIPVKRFIKEMFGFEYEFLPVVAVVHIGWCLLFFLVF
AYGIKFLNFQRR
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctttagcaggagatgatctatcggcaagatcaatgagcagcgggcgtggg
ggttgggggtcggcgaggttccgggatatttggcaaactccgcccgaagtgttcgagagg
agccaacggcatgacacggaggaggatctcatgtgggctgccatcgaacgacttcccatg
tatgatcgcctccggaaaagtatgataaggaatgttggtgataatgggaaagttgttctt
cacgaagttgatgtaactaagcttggacaacagaataagaagcaactcctagacagcatt
ttgaaggttgtcgaacaagataatgaaacttttctcaggaaattaagggatcgaactgat
agagttggcattgaaattccaaaaattgaagttagatttgagcatttatcggttgaagga
gacgtttacgtaggaagccgagctcttccttcactgtttaatgttaccttgactattata
gagagtattcttggattggttcggcttgtaccttctaggaaaagaaagattgagatactt
aaagatgtcagtggaattgtgaaaccgtcaaggatgaccctagttttgggtcctccaggt
gcagggaaaacaacattcttgcaagcacttgcaggaaggcttgatcaggatctaagatct
agtgggagaatcacatattgtggttatgaaatgagtgagtttattcctcaaagaacatgt
gcttatatcggtcaccatgatgttcaccatggtgaaatgacagtaagggaaacattggat
ttctcgggacggtgtctcggtgttggcaccagatatgaaatattgaaagagctgtcaaag
cgggaaaaagaggcagggatcaagccagatcctgaaattgatgcattcatgaaagcaaca
gctatggcaggccaacgaaccagcttggttacagattatgttcttaagatacttggacta
gaaatgtgttcggatactctggtcggggacgacatgcgtagaggtatttctggtggtgaa
aagaagcgtttgaccactggagagatgttggttggtccagcaaaggccttcttcatggac
gaaatatcgacggggctggacagttctaccacttatcagatttgcaagttcatgaggcaa
atggttcatatcctggatgtaaccatggtcatttctcttctccaaccagcacccgagaca
tacgatcagttcgaccaccttatcctactttcggaaggtcaaattgtctaccaaggtccc
acccaaggtgtccttgagttctttgaatacatgggtttcaaatgccctgaaagaaaagga
gttgcagactttttgcaagaagtaacttccaagaaggaccaagagcaatattggttcaga
aaagaccagccttatagttatgttacggtttccgagtttgtgcaggggttcaactcattc
cacattggccaacagcttgaatccgatctgagggttccttatgacagatcagtagcacgc
catcctgcattagttacagaaaactatggcatttcaaactgggagttgttcagagcatgc
tttgcaagggagtggttgctaatgaaacgtaactcattcgtgtatgtattcaagacagtc
caaattacgatcatgtcattgattgccatgaccgtatttttcagaaaagaaatgcatgca
ggcaatttggaagatggttcgaaatttttcggagctttgttttacagtctaatcaatgta
atgtttaatgggatggcagaacttgcaatgacaattttcaggcttcctgttttctataaa
caaagggacttcttgttctatcctccatgggcttttagccttcccatttggatcatcaag
atcccattttcattaatggaatctggaatatggatctgcctcacatactacaccattgga
tttgctccagctgctagcaggttcttcagacagttcctggcattctttggcatacatcaa
atggctttatccctctttaggttcattgctgctgtaggaagaacacaagtcattgcaaac
acattgggtaccttcaccttgctaatggttttcgtgcttggaggtttcattgttgcaaga
gatgacattgaaccatggatgatatggggctactatttgtctccaatgatgtatggacaa
aatgccatcgtcatgaatgaatttcttgataaaagatggaatacacaaaataatgacacc
agaattaatgcaactacagtcggacaagtccttctaaagagtagaggtttctatacagaa
gatcgttggttttggatttctgttgcagcgctgttcggattttctgttctcttcaacatt
ttattcattgtggcgttgacttacctcaaccctctgcgtgattccaaagcaatagttgtt
gatgaaaatgaaaatacgaacaagaaagagtcatcctcgggaaaaaacatacctggtact
gatctgccagtgagaaattcttcggatgccaccaacatcacggaccgaccgactggaaga
ggaatggtgttgcctttcaaaccactttcacttgcgttcaaccatgttagctactctgta
gatatgccttctgaaatgaagagccaaggtgttgaagaggatcatcttaagttgctacga
gatgttagtggcgctattagaccagggatattgacagcattggtgggtgtcactggtgcc
ggaaagacaaccctgatggatgtattagcaggaaggaaaaccgggggatacattgaggga
agcataagcatctctggatatccaaagaaccaagctacatttactcgtgtcagcggctac
tgcgaacaaaatgatatccactctcctcatgtcacagtctatgaatctctgctgtactca
gcctggcttcgtctttcttcagaagttgacaccaagacaagaaagatgttcattgaagag
gttatggagttgattgagctcaagccactacgggatgctatagttggccttccaggagta
gatggtctttcaacagaacaaaggaagaggttgacaattgcagttgaattggttgctaat
ccttctatcatctttatggatgagccaacatccgggcttgatgccagggccgctgcgatt
gtaatgcggacagtgagaaacaccgttgatacggggagaactgtagtgtgcaccattcac
caacctagcatagacatctttgagtcttttgatgagttgctgttgatgaaaagaggaggg
caaatcatctatgccggacctcttggtcgcaactctcacaatcttgtacaatattttgag
gctataccaggagttccaaaaatcaaggaaggatataatccagcaacatggatgcttgaa
atcaccgctcctgcagttgagaatcagctgaatgcagactttgcagaaatttacgctgaa
tcctccctttatcagaggaatcaagaacttattgaagagctcagtcatccggttccgggc
tctgaggatctccactttccgaccaaatattctctaccattcctctctcaatgcaaggtt
tgtttcctgaaacaacactggtcttacaagaggaaccctcggtacaatgctattaggttc
ttcacaacaattgtcgtcggcatcttgttcggccttatcttttggaacaaaggacaacaa
atagcaaaacaacaagatgtactgaactttttcggagcgatgtatagtgcagtatttttc
cttggagcagtgaatgctacaacggtgcaaggcgtagttgcaatagagagaaccgttttt
tatcgcgaaagagctgccgggatgtattctgaacttccttacgcgcttgcgcaggtggca
attgagataatctataccgcaatccagacagcgatctacgttgcactcctatactcaatg
attgggtatgaatggaaggccagcaacttcctatggttctactacttcataacagctagt
tttgtctacttcacactgtatgggatgatggttattgctctcactccaggggcacaagtt
gctgcaattgtcatgtcattcttcctaagtttatggaacatcttctcgggttttctcatc
ccgagaccgcgaatcccggtatggtggaggtggtattattgggtaactccagtggcttgg
acactctatggccttattacgtctcaattgggtgaccgaaactccgatcttgaggtgcct
ggatttcccgacattccggttaagagattcattaaggaaatgttcggtttcgagtatgag
ttccttcctgtagttgctgtcgtacacatcggttggtgtctgttgtttttcttggtattt
gcctacggtatcaagttccttaactttcaaagaagataa
DBGET
integrated database retrieval system
