| Entry |
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| Name |
(RefSeq) endoribonuclease Dicer homolog 2-like
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| KO |
| K11592 | endoribonuclease Dicer [EC:3.1.26.-] |
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| Organism |
gab Gossypium arboreum (tree cotton)
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| Brite |
KEGG Orthology (KO) [BR:gab00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:gab03036]
108453104
Chromosome and associated proteins [BR:gab03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108453104
microRNA pathway
RISC loading complex
108453104
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:84721129..84733472
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| AA seq |
1395 aa
MEPVDMEEDISQLLPADPLPFARSYQLEALEKAIKQNTITYLETGSGKTMIAIMLLRSYA
YLIRKPSPFFAVFLVPKVVLVKQQADAVEMHTDLNVGKYWGDMQVDFWDGEKWKQEIDKY
EVLVMTPQILLDGLRHSFFKINMIKVLIIDECHHARGKHPYASIMREFYHRPLEAGASNL
PRIFGMTASPINSKGANSADSYWQKIHELETIMNSKVYTCVSASVLAQFVPFATPKFKFY
QHMAIPNVLYSHLVEELTVLKVKHECSLDNLDLEASAAESTRKKLSKIHSALIHCLYELG
AWLALKAAECFSCYESELLMWGKLDVFGEKIIRSYSVDAFRAIETCMPSGLDWTIANDVK
GSVAAGFLTTKVLCLIESLFEYRVLKDIRCIIFVERVITAVVLQSLFSELLPRYSNWKTK
YIAGNNSGLQNQTRKKQNEIVEEFRKGMVNIIVATSILEEGLDVQSCNLIIRFDPSPTIC
SFIQSRGRARMQNSDYLLMLKSGDFSTHSRLKNYLTSGDVMRKESLCHASYPCSALCEGL
DDEEFYHVASTGACMTLSSSVGLMYFYCSRLPADGYFKPIPRCVIDKQMGLCTLLLPKSC
PIQTFCVQGDIKNIKKKACFEACKKLHQIGALTDNLVPDIVFEEHDVEEIEKEPYNDDQP
IFFPPELVNKGSLDSMTKYYCYLMELKRNFDYEVPVHNIMLLVRNQFDMDEKSVNIELEV
DRGTLTVNMKYIGLIRLNSDQVILCRRFQLAVFQVLMDRKAEKLAEVLCDHTLGNNSEID
YLLLPSNYVGQSPLIDWLSVTSVTFSYEKACKNHVNCNADMIQIKSGLVCTCMIQNSLVS
TPHNGHAYIISGLLTNINANSLLRLSDGRVMTYKEFYEKRHGINLCYSQVSFLAGRHIFP
VQNHIQRCRKQKEKESSNSFVELPPELCCVVMSPISISTFYSFTFLPSIMHRLESLLLAT
SLKKMHLDHCVQNVAIPTMKVLEAITTKKCLENFHLESLETLGDSFLKYAVCQQLFKKYQ
NHHEGLLSIRKEKIISNTALSMLGCDKKLPGFIHDEPFDPKDWMIPGYNCGSYSLNEETL
CNAKKIYVRGRRKLKFKKVADVVEALIGAYLSTGGEAAGLLFLDWIGISINFTNIPYERH
FKVRAEKFVNVQHFESLLHYSFQDPSLLVEALTHGSYMLAEIPGCYQRLEFLGDSVLDYL
ITLHLYNKYPGITPGLLTDLRSASVNNNCYALSAVKAGFHKHILQSSQKLYKDIKEIVES
FQELSLEYTFGWESEKSFPKVLGDVMESLAGAIFVDSGYNKEIVFQSIRPLLEPMITPET
LTVHPVKELYELCQKEHYELRKPIVSHEDGISSITIEVEANGKVFKRTSTACDKKMAKKL
AFKEVLKSLKGANFS |
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| NT seq |
4188 nt +upstreamnt +downstreamnt
atggagccagttgacatggaggaggatatttctcaactactccctgctgatcctctccct
tttgccagaagctaccagcttgaagcattagagaaagctatcaagcaaaacacaataact
tacttggaaactggatctggcaagacaatgatcgccatcatgcttctccgcagctatgct
tatcttatccgcaagccctcaccctttttcgctgtgttcttggttcccaaagttgttctg
gtgaaacaacaagctgatgctgtggaaatgcatacggacttgaatgttggaaagtattgg
ggagatatgcaggtcgacttttgggatggggagaagtggaaacaagaaatagataaatat
gaggtgcttgtgatgacacctcaaattttacttgatggattgaggcatagcttcttcaag
ataaacatgataaaggttttgataattgatgaatgccatcatgcccgaggaaagcatcct
tatgcctctattatgagagaattctatcatcgcccgttagaagctggtgcatctaatctt
cctaggatttttgggatgactgcttctcctataaattcaaaaggggcaaactctgctgat
agctattggcagaagatccatgaattggagactattatgaactcaaaggtgtatacatgt
gtaagtgcatcagtgcttgctcagtttgttccatttgcgactccaaagttcaagttttac
caacatatggcaattccaaatgttttatattcacacttggtagaggaattgactgttttg
aaagtaaagcatgaatgttcgttggataatttggatcttgaagcttctgcagcagaatct
acaagaaagaaactatcaaagatacattcagctttaatacattgtttatatgagcttggt
gcttggttggctctgaaggctgcagagtgcttttcatgttatgaaagtgagcttcttatg
tgggggaaattggatgtctttggcgagaaaattattaggagctacagcgtggatgctttt
cgtgcaattgaaacatgcatgccatctggtctggattggaccatagctaatgatgttaaa
ggcagtgtggctgctgggtttcttaccacaaaagttttatgccttattgaatctttattc
gaatacagggtgttgaaggacataagatgtataatttttgttgagagggttataacagct
gttgtgctacaatcgctattcagtgaattgcttcccaggtacagtaattggaagactaag
tacattgcgggaaataactctggattgcagaatcagacaaggaaaaaacaaaatgaaatt
gtagaagaattccgcaaaggcatggttaacataatcgttgcaacttcaattcttgaagaa
ggcttggatgttcaatcatgcaacctaattatcagatttgatccttcaccaacaatttgt
agtttcatacagtctcgaggacgtgctagaatgcagaactcagattatctattaatgctg
aagagcggggatttttctacacattctcgactgaagaactatcttactagtggagatgta
atgagaaaggaatctttatgccatgcatcatatccttgttctgctctttgtgagggctta
gatgatgaagagttttaccatgttgcgagtacaggggcatgtatgactcttagttctagt
gttggtctaatgtacttctattgctcacgtctccctgcagatgggtattttaaacctatt
ccgaggtgtgttatagacaagcaaatggggctttgcaccctccttctacccaagagttgc
cctatacaaactttttgtgttcagggtgatataaaaaacataaagaaaaaagcatgcttt
gaagcatgcaagaaactccatcaaattggtgctttaacagacaatcttgttcctgatatt
gtttttgaagaacatgatgtggaagaaattgaaaaggagccctataatgatgatcaacct
attttctttccacctgaactagtaaataagggttcactggactccatgacaaagtactac
tgctacttaatggagttgaagcggaactttgattatgaggttcctgttcataacatcatg
cttcttgtcaggaatcagtttgacatggatgaaaaaagtgtgaatattgaattagaagtt
gacaggggcacattaacagttaacatgaaatatattggactaatacgtcttaattctgac
caggttatcttatgtagaaggtttcagcttgcagtttttcaagtacttatggatcgtaaa
gctgaaaagttggcagaggtgttatgtgaccataccttggggaataattctgaaattgat
tatctactcctcccatcaaattatgtgggccagagtcctctgattgattggttgtcagtt
acttctgtcacattttcttatgaaaaggcctgcaagaatcatgtgaactgcaatgctgat
atgatacagatcaaaagcggtctggtgtgcacttgcatgatccaaaattctttggtctct
actcctcataatggtcatgcttatattatcagtggtcttttaactaatataaatgcaaat
tcacttttgaggttgagtgatggacgcgtaatgacttacaaggagttttatgaaaaacgc
cacggtatcaatttatgttatagtcaagtctctttccttgctgggcgacatattttcccg
gtgcaaaatcacattcaaaggtgcagaaaacagaaagagaaagaatcaagtaactcattc
gtagaattgcctcctgagctttgttgtgtagtaatgtctcccatatcgatcagcacattt
tattctttcacatttcttccatcaatcatgcatcgactcgagtctttgctccttgctacc
agcttgaaaaagatgcatttggatcattgcgtgcaaaatgttgccattccaaccatgaag
gttttggaggcaattactaccaaaaagtgcctagaaaactttcatttggaatcactagag
actcttggtgactctttcttgaagtatgctgtttgtcaacagcttttcaaaaaatatcaa
aatcatcacgagggccttcttagtattaggaaggaaaaaattatttcaaatacagctctg
tccatgctaggatgtgacaagaaacttccggggtttatccatgatgagcctttcgatccc
aaagactggatgattcctggatataattgtggaagttactcattaaatgaggaaacactg
tgtaatgcaaaaaaaatatatgttagaggaagaagaaagctgaagtttaagaaggttgct
gatgttgttgaggcacttattggtgcataccttagcacgggaggcgaagcagctggatta
ctatttttggattggatcggtataagtattaatttcacaaatataccatatgaaagacat
tttaaagtgcgggccgagaagtttgttaatgtccagcactttgagtcccttctacactat
tcattccaagacccttctttgttggtggaagcattaacccatggttcttatatgcttgct
gaaattccaggatgttatcagcggctggaatttctaggggactccgttttagattatctt
attactctgcatttatataataaatatcctgggatcacgccaggattattaacggatctt
aggtcagcatctgttaacaacaattgctatgcattatcagctgtaaaggctggatttcat
aagcacattctccaaagttcacagaagctttacaaggatataaaagaaatcgttgaaagt
tttcaggaattatcgttggaatacactttcggctgggaatctgaaaaatctttccccaag
gtactcggtgacgtgatggagtcacttgctggagctatttttgttgattcaggatacaat
aaggaaatcgtattccagagtataaggccactgttggagcccatgattactccggagact
ctgacggttcaccctgtcaaagagctatatgagctgtgtcaaaaggagcattatgaacta
agaaaacccattgtttcacatgaggatggtatttcttctattacgatagaggttgaagca
aatgggaaggtattcaagcgcacatccacagcttgtgataagaagatggccaagaaactg
gctttcaaagaagttttgaagtctctaaagggagcaaatttcagctag |
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