Gossypium arboreum (tree cotton): 108453111
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Entry
108453111 CDS
T05776
Name
(RefSeq) PWWP domain-containing protein 1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00270
Cysteine and methionine metabolism
gab01100
Metabolic pathways
gab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
108453111
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108453111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108453111
03032 DNA replication proteins [BR:
gab03032
]
108453111
03036 Chromosome and associated proteins [BR:
gab03036
]
108453111
Enzymes [BR:
gab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
108453111
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108453111
DNA replication proteins [BR:
gab03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
108453111
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108453111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
108453111
NCBI-ProteinID:
XP_017606528
LinkDB
All DBs
Position
5:complement(27597417..27602547)
Genome browser
AA seq
1117 aa
AA seq
DB search
MIPVVNDDAEFDKRSDKIEEKARVSTDEAIGSRNEDNRLSLGVSDEEARVSPMELDLKDF
RVSENNRSEEVRESNANSADRRIGDESRVFDVNDRVEQNDMINDDENDRIENSEKLEKDT
GSDYKSLLSEFDDYVANDRIGGGTSRALSYGFEVGDMVWGKVKSHPWWPGHIFNEAFASS
SVRRTRREGHVLVAFFGDSSYGWFDPAELVPFDRHFMEKSQQTNSRTFVKAVEEAMDEAS
RRRGLGLACKCRNPYNFRPTNVQGYFVVDVPDYEPNGVYSVNQIRNARNSFKPSETLSFV
KQLASDTGAFDQQSIEFLKNKATVCSFRKAVFEEYDETYAQAFGVRPSRPSNSAVDAPTR
LSKEAPRAPLSGPLVIAEALGGGKSSKKPVKAKDHLKKDRYLFKRRDEAASPTMPSTFRE
GSPTFVAGDYVLQKRAPVSQIPVKQEQTVVMSKDGVSSSGDLSGNAVPSANQTSAPAAAI
DEKPSLNKSDGVSATFQSEGDVIFDPKSEGGKLSRSYEVVQKPDMDSTAKLEGGQGLDQV
RDGLTSGHPYPVDIKRPGGMTAEGGVKKVKKRSSADIGVENSASVEKKKKKKKKETGSET
NSDKPKKPSLLGKDGAKSAQIGLGPREESQANQLKKDVDPTHSSFNSVGASTTIGVGNSG
FELAQLLSDLHALALDPFHGVERNSPTIVRQCFLRYRSLVYQKSLVVLPTSEMDSTELRA
GKPPLVGGSDNTKENVRDSTPSKPVRPLARPDDPTKAGLKRLPSDRLEEIAAKRLKKLSQ
LKSLAAEKKGNLRASEAPKVEVKEQPTTGLPARPPKKPDSARKVESLPRAVEPTMLVMKF
PPQVSLPSVAELKARFGRFGSLDQSAIRVFWKSSTCRVVFRHKIDAQAAYRYANGTNSLF
GNVNVRYHLRSVEAPTAEALDSDKARGDETGSETIRVKDPVVERPAAPVVAHQPLPQTTV
QLKSCLKKSTSEEAGQASGGNGGRGTARVKFMLGGEETSRGDQLMVGNRNNFNNNPSFGD
TAAPSVAMEFNTKNIQKVIPQSSSSFPVNPPIPQFGKAPTEVAPRNVHNLNTQTTTLPAS
STTSMDISQQMLSLLTKCNDVVTNVTSMLGYVPYHPL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgttgtgaacgacgatgctgaatttgataaacgatcggataaaatcgaagag
aaagctagggtttctaccgatgaagctattggtagccgtaatgaagacaatagattgagc
ttaggagtttctgatgaagaagctagggtttctccaatggagctcgatttgaaagatttt
agggtttcagagaataatagatctgaggaggttagggagagtaatgccaatagtgcagat
agaagaataggcgacgaatctagggtttttgatgtaaatgatcgagtggaacagaatgat
atgataaacgacgatgagaatgatagaatagagaattcagagaagctggagaaggatact
ggttcagactataagtccttgttatctgagttcgatgattatgtagccaatgatagaatt
ggtggagggacttcaagggcgttgagttatgggtttgaagtgggtgatatggtttgggga
aaggtgaaatctcatccttggtggcctgggcatatatttaacgaagcatttgcatcttca
tctgtacggcggacaaggagagagggacatgtgttagttgcgttctttggggatagtagt
tatggatggttcgacccagctgagcttgtcccttttgatcgtcattttatggagaaatca
cagcagacaaactcgaggacttttgtcaaggctgtggaagaggccatggatgaggcaagt
cggaggcgtggtcttggtttggcttgtaaatgtaggaacccatataattttcggcccaca
aatgtccaagggtactttgtagttgatgtgcctgattatgaaccaaatggggtttattca
gtgaatcagattaggaatgcaagaaatagttttaagcctagtgagaccctttcatttgtg
aaacaattggcatcagacactggagcttttgaccagcaaagcattgagtttcttaagaat
aaggctactgtttgttctttccggaaggctgtgtttgaggagtatgatgagacgtatgca
caggcttttggggtgcggccatcacgcccttctaattcggctgttgatgctccaacacga
ctttctaaagaggcaccgcgagctcctttgagtggaccactggtgatcgcagaagcctta
ggtggtgggaagagttctaaaaaacctgtaaaagctaaggaccatttaaagaaagacaga
tacctattcaaacgaagagacgaagcagctagtccaacaatgccatcaactttcagagag
ggatcaccaacatttgtagctggagattatgtgttgcagaagagggctccagtttctcag
attccagtaaaacaagagcagactgttgttatgagcaaggatggtgtaagttctagtgga
gatttatctggaaatgcagttccatctgcaaaccagacttcagcccccgctgctgctata
gatgaaaagccgtctttgaataaaagtgatggtgtgtctgcaacttttcagtccgaaggt
gatgttatatttgacccaaaatctgagggtggaaaattgtccagatcatatgaagtagtt
cagaaacctgatatggattccactgcaaaactggaaggaggccagggattagatcaagtt
cgagatggtcttaccagtgggcatccttacccagttgatataaagcgccctggtggcatg
actgctgagggtggggtgaagaaagtgaaaaagcgctcctcagctgatataggtgttgag
aactctgcttcggtggagaaaaagaagaagaaaaagaagaaggagactggttcagaaaca
aactctgataaaccaaagaagccttctctccttggaaaagatggggccaaatccgcacag
attggtttgggtcctagagaagagtctcaggcgaatcagctgaagaaagatgttgatcct
actcattcctcattcaattctgttggggcttccacaaccattggtgtgggaaattctgga
tttgaacttgcacaactactgagtgatttgcatgctctggctcttgatccctttcatggt
gtggaaaggaatagcccaacaatcgttaggcaatgctttttgcgataccggtcacttgtt
tatcagaaaagtttggttgtgttaccaacatcagagatggattctactgagcttcgtgct
ggtaaacctcctttggttggaggctctgacaacaccaaggagaatgttagagactcgact
ccttcaaaaccagtgagaccccttgcaagacctgatgatccaacaaaagctggactgaag
cgtctcccatctgatcgtctagaagaaattgctgcaaagaggttgaaaaaacttagtcag
ttgaaatcattagctgcagagaagaagggcaatctgagggcttcggaagctccaaaagtt
gaagttaaagaacagccaactacagggctcccagcaagaccacctaaaaaaccagattct
gcaaggaaagtggagtctctacctagggctgttgagcctacaatgctggttatgaagttt
cctcctcaggtatcacttccatcagttgcagaattgaaggcaagatttggacgcttcggc
tcattagatcagtcagctatccgtgtgttttggaagtcctcaacatgccgtgttgtcttc
agacacaagattgatgctcaggctgcatatagatatgctaatggaaccaactccctattt
ggcaatgtgaacgtgagataccatcttcgaagtgtggaagctcctacagctgaagcacta
gattctgacaaggcacgaggagacgagactggcagtgaaaccatacgagttaaggatcct
gtggttgaaagaccagcagcaccggtggttgcacaccagccacttccacaaacgacggtc
cagctgaagtcctgcttgaagaaatcaacaagtgaagaggcagggcaggcaagtggaggt
aatggaggtagaggtacagcgcgtgtaaaattcatgttgggtggggaagaaactagtagg
ggagatcaattgatggttggtaatagaaacaacttcaacaacaatcccagttttggtgat
actgctgcaccttctgttgcaatggaatttaatactaagaacattcaaaaggtcattcct
caatcttcgtcttcgtttcctgttaatccccctattcctcaatttgggaaagcccccacc
gaagtggctcccagaaatgttcacaatcttaatactcaaaccaccaccctaccagctagt
agtacaacaagcatggatatttcacagcagatgctaagcctcctgacaaagtgcaacgat
gtcgtaacaaacgtaacgagcatgttgggctatgtgccttatcatcctctttga
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integrated database retrieval system
