KEGG   Gossypium arboreum (tree cotton): 108453152
Entry
108453152         CDS       T05776                                 
Name
(RefSeq) ABC transporter C family member 13 isoform X1
  KO
K05674  ATP-binding cassette, subfamily C (CFTR/MRP), member 10
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:gab00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    108453152
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:gab02000]
    108453152
Transporters [BR:gab02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    108453152
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N Dynamin_N MMR_HSR1 RsgA_GTPase AAA_29 nSTAND1 AAA_23 AAA_16 AIG1 AAA_22 KAP_NTPase ATP-synt_ab
Other DBs
NCBI-GeneID: 108453152
NCBI-ProteinID: XP_017606583
LinkDB
Position
5:9490974..9513572
AA seq 1474 aa
MKQLKFLLCPNSPFVWDGNGFSQCFDDLVLGFGINAASIAVICIVGIMRRRARTNWTVKF
SEKALLHSIAVIGACLSCVDAILLVKKKLHGDFVLYHELLFRFSHFMVWATIVFSLRCAC
FQHIFCNMVLCIWWTIKPLFGIPHLQKAFSSMEVLDCLKESSVLFLDIMFCVSINCIRIK
QASASSSPMEDSLLCAEMDIEEGCHRDSRRMQGCWDHIVFRSIISVMNSGLGKQLGFDDL
LLLPTDMDPSICHEKLLSCWQHQHNNSSSNASLFRAIFSAYGWPYLRLGLLKVFNDFIGF
AGPLLLNKLIRFLQQGLHSTNPGKDVRGSGNLDGYVLAISLGLVSVVKSFSDTQYTFHLS
KLKLKLRSSIMTVIYHKCLSVSIAERSKFSEGEIQTFMSIDADRTVNLCNSFHDMWSLPI
QIGVALYLLYTQVKLAFMAGLAITILLIPVNKWISELIASATEKMMKQKDERIRRTGELL
AHIRTLKMYSWEILFSSWLMDTRSLELKHLATRKYLDAWCVFFWATTPTLFSLCTFGLFT
LMGHQLDAAMVFTCLALFNNLISPLNSFPWVINGLIDAFISSRRLSRFLCCSEQKPELEQ
KAKFQPSFSNEKYDLVSNDMVVVMHDASCAWSSDNEDQNLVLNHVTLSLPKGLLVAVVGE
VGSGKSSLLNSILGEMRLVFGSIYSNGSVAYAPQVPWILSGTIRDNILFGKNLDSQRYAD
VLEACALDVDISLMAGRDLAYIGEKGTNLSGGQRARLALARAMYQGSDVYLLDDILSAVD
AHVAKWILQNAILGPLVEHKTRILCTHNVQAISSADMIVVMERGHVKWVGNSSDLAVSAY
SGFASVNEFDASYIHSKLYSTNTSYMDKQSPLLENNTLDVPLEAQDIIEAEQRKEGKVEL
IVYKKYAGFAGWFISVVILLSAILMQASRNGNDLWLSYWVDTTGISQGKYSTSFYLLVLC
IFCIINSSLTLVRAFSFAFGGLKAAVQVHNTLLNKVINAPAQFFDQTPGGRILNRFSSDL
YTIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLFPFWYIYSKLQFFYRSTSREL
RRLDSVSRSPIYASFTETLDGSSTIRAFNSEDYFLARFTELVAQYQRTSYSELVASLWLS
LRLQLLAASIISFIAVMAIIRSYGSLPISFGTPGLVGLALSYAAPIVSLLGSFLTSFTET
EKEMVSMERALQYMDVPQEELCGFQYLNSSWPFEGVVEFQNVTMKYIPSLPAALNDITFT
IARGTQVGIVGRTGAGKSSVLNALFRLNPICGGRILVDGLNIVDIPVRDLRARLAVVPQS
PFLFEASLRDNLDPLRMSNDEKIWDVLEKCHVKEEVEVAGGLEAKVKEAGTSFSVGQRQL
LCLARALLKSSKVLCLDECTANVDTQTASILQKTISTECQGMTVITIAHRISTVLNMDNV
FVLNQGALVEEGNPNALLQDESSIFSSFAKASTM
NT seq 4425 nt   +upstreamnt  +downstreamnt
atgaagcaactcaaattcctcctttgccctaattctcctttcgtttgggatggaaatggc
ttctcgcaatgttttgatgacttggtcttgggttttggtataaatgcagcaagtattgcc
gtgatttgcatagttggaataatgagaagaagggcccgaacaaactggacggtaaaattt
tcagagaaggctcttctacattctatagcagtcattggagcatgtttatcatgcgtggat
gccattttgcttgtgaagaaaaagcttcatggagattttgtcttatatcatgagttgctt
ttcagattttcgcatttcatggtctgggcaactattgtattctccttgaggtgtgcctgt
tttcaacacatattttgcaatatggtcctctgtatatggtggactataaaacctctgttt
ggaatccctcatctgcaaaaggcattctcttcaatggaggttttagattgtcttaaagaa
agctctgttttatttttggatattatgttttgcgtatccattaactgtatccggataaaa
caggcatccgccagtagcagcccaatggaagattcacttctttgtgctgagatggacatt
gaggaaggttgtcacagggattctagaagaatgcagggctgttgggatcatattgtgttc
agatctatcatttctgtaatgaattctggtttgggaaagcagcttggctttgatgattta
cttttgctgccgactgatatggatccttctatatgtcacgaaaaactattaagctgctgg
caacaccagcacaataattcttcctcaaatgcatcattatttagagcaatcttctctgca
tatggatggccatatcttcgtctaggtttattaaaggtttttaatgatttcattggtttt
gctggaccactgcttctgaataagctaattcggtttcttcaacaaggtttgcatagtact
aatcctggaaaagatgtcagaggttctggaaatttggatggctatgttcttgcaatatcg
ttaggcctagtatcagttgtcaaatccttttctgatacacagtatactttccatctttca
aagctgaagctaaagttacgatctagtatcatgactgttatctatcataagtgtttatca
gtcagcatagcagaacgatcaaagttttcggagggggaaattcaaacatttatgtctata
gacgctgatcgaactgtcaatttatgcaacagtttccatgacatgtggagcctacctata
caaattggagttgcactgtatcttctgtatacgcaagtcaaattggctttcatggctgga
cttgcaataaccatcttactaataccagtaaataaatggatctctgaattgattgccagt
gccactgagaaaatgatgaagcagaaggatgagaggattaggaggacaggggaacttttg
gctcacattcgcactttaaagatgtatagctgggagatccttttctctagttggttgatg
gatacaagatctttggaattgaaacacttagctacacggaagtacttggatgcctggtgt
gtattcttttgggctacaacaccaactcttttctctttatgcacatttggactctttaca
ttgatgggacatcagctcgatgctgcaatggttttcacatgtcttgctctttttaataat
ttgatatctcctctcaattcattcccatgggtcatcaatggacttattgatgcctttata
tctagcagaaggttgagcaggttcctttgttgttcagaacaaaaacctgaactggaacag
aaagctaaatttcaaccaagtttctcaaatgaaaaatatgatcttgtctccaatgatatg
gtagtagttatgcatgatgcatcttgtgcttggtcaagcgataatgaagatcagaatttg
gttttgaatcatgtcacactaagtctcccaaagggtcttttggttgcagtagttggagag
gttggttcaggcaaatcatcattgttaaattctatattgggagaaatgaggcttgttttt
ggatcaatatattcaaatggctctgttgcatatgcaccacaggttccatggatcttatct
ggaacaatacgtgacaatatattgtttggaaagaatctagattcccaaaggtacgcagat
gttttagaggcatgtgctctagatgttgatatttcattgatggctggacgtgacttggct
tatattggagagaaaggaactaatttatcaggtggacagagagctcgtcttgctttagca
agggccatgtatcagggttccgatgtttatttgcttgatgacatccttagtgcagttgat
gcacatgttgctaaatggattttgcaaaatgctattcttggtcctcttgtggaacataag
actcgtatcctctgtactcataatgtccaggcaatatcttctgctgacatgattgttgta
atggaaagagggcacgtgaagtgggtaggaaactcgtctgacttggcagtttcagcatat
tcggggttcgcatcagttaatgaatttgatgcatcatatattcatagtaaattatacagc
acaaatacttcctacatggacaaacaaagccccctgttggagaataatactttggatgtc
ccactggaagcacaagatattattgaagctgagcagaggaaagagggtaaagttgaactt
attgtttacaaaaagtatgctggatttgctggttggttcatttcagttgtgatattgctt
tctgcaatcttaatgcaagcttctcgaaatggaaatgatttgtggctatcatattgggtt
gatacaacagggatcagtcaaggaaaatactcaacatccttttatctgctggtactttgc
atcttctgcatcattaattcttctctgaccttggtgagggctttctcatttgcatttggc
ggtctaaaagctgcagttcaggtgcataatacactgcttaataaggttattaatgcacct
gcccagttctttgatcaaacaccaggtggacgaatacttaacaggttctcatcggatctc
tatacaattgatgattctctcccattcatcctcaacattctcctggctaattttgtgggc
ctgttaggaatagcggtagttttgtcctatgttcaggtctttttcttgcttctactattt
ccattttggtacatctatagcaagctgcagttcttctacaggtcgacatctagagaactg
cgaaggttggacagtgtctcacgctctccaatttatgcatccttcacagagacactcgat
ggatcatcaactatacgagctttcaattctgaggattatttcttggctagattcactgag
cttgtagcacagtatcagagaacttcatattcagagttagtagcaagtttgtggctttcc
ctgcgccttcagttattagctgcatccataatatcatttattgctgtgatggctatcatt
cgatcttatggaagtttaccaattagttttggtaccccagggctggtaggattagccctt
tcatatgcagctccaattgtttccttgttgggaagcttcttgacaagttttactgaaaca
gaaaaagaaatggtttcaatggagagagctcttcagtatatggacgtgcctcaagaagaa
ctctgtggattccagtatttaaattcgagttggccatttgaaggagtggttgaatttcag
aatgttaccatgaaatatatcccatctttaccagcagcactaaatgatatcaccttcacc
atagcaagaggaacacaggttggaattgttggaagaactggtgctggaaaatctagtgtt
ttgaatgccctttttcgcctaaacccaatatgcggaggacggattttggtggatggcttg
aacatagttgatattccagttagagatcttcgtgcacgcttggctgttgtaccccagagc
ccatttttatttgaagcatcattaagggacaacctagatcctctccggatgagcaacgac
gagaaaatatgggatgtcttggagaaatgtcatgttaaggaggaagtagaagtggcagga
ggactggaagctaaggtaaaggaagctgggacgtcattttctgttgggcaaaggcagctt
ctttgccttgcacgggctcttctcaagtcttctaaggttctttgtttggacgaatgcact
gcaaatgtggatacgcagacagcttcaattctacagaaaactatatccacagaatgccaa
ggaatgacggtgatcacaatcgcacaccgtatttcaacagttttgaatatggacaatgta
tttgttctcaatcaaggagctctggtggaggaaggtaacccaaatgctcttctacaagat
gaatcctccatattttcaagctttgctaaagcgtctacaatgtaa

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