Gossypium arboreum (tree cotton): 108453172
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Entry
108453172 CDS
T05776
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X2
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108453172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108453172
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108453172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_25
AAA
AAA_28
AAA_29
Rad17
RsgA_GTPase
DO-GTPase2
TIP49
RecA
Motif
Other DBs
NCBI-GeneID:
108453172
NCBI-ProteinID:
XP_017606609
LinkDB
All DBs
Position
5:complement(10033134..10040861)
Genome browser
AA seq
1467 aa
AA seq
DB search
MEGGDIIKASNSLRGSLRAGSLRAGSSSIWRNSAVDVFSRSSRDEDDEEALKWAALEKLP
TVARLRKGILTGSQGGANEVDVDNLGWQEKRTLLERLVKVAEEDNERFLLKLKNRIDRVG
IDLPTIEVRYENLNIEAEAFVGTSALPSVLNFITSIFENFLIDMGVLSSRKKKLTILKDV
SGIVKPGRMTLLLGPPSSGKTTLLLALAGKLSPDLKFSGSVTYNGHTMKEFVPQRTAAYI
SQHDLHLGEITVRETLAFSARCQGVGTRYDMLAELSRREKEANIKPDPDIDVFMKAVATE
GLEASVITDYILKILGLDVCADTMVGNEMLRGISGGQRKRVTTGEMLVGPARALFMDEIS
TGLDSSTTFQIVNSLRQTVHILNGTAVISLLQPAPETYDLFDDIILLSDGVIVYQGPREH
VVSFFESMGFRCPERKGVADFLQEVTSKKDQMQYWVRKDQPYRFITANEFAEAFQSFHVG
MKLGDELGTPFDKTKSHPASLTTQKYGVGKWELLKACIAREFLLMKRNSFVYIFKCMQLT
VMALITMTLFFRTEMHKDSVQGGRIYMGALFFGMTMIMFNGMSELSMTISKLPVFYKQRD
LLFFPSWAYALPSWILKIPITFLEVSIWVFITYYVIGFDPSAERFFRQYLILVLTNQMAS
GLFRSIAAIGRNMIVANTFGSFALLVLFALGGFVLSREDIKGWWIWGYWISPMMYGQNAL
MANEFLGHQWSRVLPGSNVSLGVEVLNSRSFFPDSYWYWIGVGGLIGFVLLFNFVFTVAL
SYLAPFEKNKAVISDEPESDDQVNGAGVGGSIQLTNQESSSSHVNRSEIQDDIQRSTSSM
SFSMSDATVGANGKGKKGMVLPFEPHSITFDDIVYSVDMPQEMKEQGVPEDRLVLLKGVS
GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGNITVSGFPKKQETFARVSGYCEQ
NDIHSPHVTVYESLLYSAWLRLSSEVDAQTRKMFIEEVMELVELKPLRHALVGIPGVNGL
STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS
IDIFEAFDELFLMKRGGQEIYVGPLGHHSRHLIKYFEGIQGVSKIKDGYNPATWMLEVTS
TAQELSLGVDFAEIYKKSDLYRRNKALIEDLSKPAPGAKELYFATQYSQSFLTQCTACLW
KQHWSYWRNPPYTAVRFLFTTVIALMFGTVFWDLGSKTKRIQDLSNAMGSMYAAVLFLGI
QNASSVQPVVAVERTVFYRERAAGMYSAMPYAIAQVLIEIPYIFVQASVYGLIVYAMIGF
EWTVAKFFWYLFFMFFTLLYFTFYGMMAVAVTPNHYIAAIVSAAFYGVWNLFSGFIIPRP
SMPIWWRWYYWICPVSWTLYGLVASQFGDITHMLEDGNNETVEQYLRNFYDFRHDYLGLV
AAVIVSFAVLFGAIFTVSIKMFNFQRR
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggtgacattattaaagcgagtaatagtttacggggaagtttacgagcagga
agtttaagagccggaagctcttcgatatggagaaacagtgctgtggacgtattttcaagg
tcttcacgagatgaagatgatgaagaagctttgaaatgggctgcacttgagaaactacca
actgtcgctcgtctcaggaaaggtatattaactggctctcaaggtggtgccaatgaggtc
gatgttgataaccttggatggcaagaaaagaggactttacttgagaggttggtcaaagtt
gcagaggaagacaatgaaaggttcttgttgaagctcaagaatcgtatagacagggttggc
atcgatcttcccacaatcgaagtcagatatgaaaatctaaatattgaagccgaagctttt
gtaggaaccagtgctttgccttctgttcttaatttcattactagcatattcgagaacttc
ttaatagatatgggtgttctttctagtagaaagaaaaagctgactatcctcaaagacgtc
agtggcatcgttaagccaggaaggatgacattgcttttgggtcctccaagttctggaaaa
accactctcttgttggctctggccgggaagcttagtcctgatctcaagttttcggggtct
gtgacatacaatgggcataccatgaaggagtttgtgcctcagagaactgctgcctatatc
agtcaacatgatcttcacttaggagaaattactgtgagggaaactttggccttttctgca
agatgccaaggtgttggaacccgatatgatatgttggcagagctatcaagaagagagaaa
gaagcaaacattaaacctgatcctgatattgatgtcttcatgaaggcagtagcaacagaa
gggctggaagcaagtgtaatcactgactatattttgaagattttaggactggatgtatgt
gcagacactatggtaggaaatgaaatgttgaggggtatctctggaggacaaaggaagcgt
gtcacaacaggtgaaatgctggttggacctgccagggcactgtttatggatgagatatct
actggtctagacagctctactacattccaaattgtgaactccctcaggcaaactgttcac
atccttaatggaactgcagtcatctcccttctacagccagctcctgagacttacgatctt
tttgatgacattattctcctttctgatggagtgatagtatatcagggtcctcgtgaacat
gtggtgagctttttcgagtctatgggcttcaggtgccctgagagaaaaggtgtggctgat
ttcttgcaagaggttacatcaaagaaagaccaaatgcagtattgggtacgtaaagatcaa
ccttacaggtttatcactgccaatgaatttgctgaggcattccaatctttccatgtggga
atgaaacttggagatgaacttgggactccatttgacaaaacaaagagccatccagcttct
ttgacaacccaaaaatatggtgttgggaagtgggagctgttgaaagcttgcatcgcaagg
gaatttctgcttatgaagagaaactctttcgtgtacatcttcaagtgtatgcaactcaca
gtgatggccttaattactatgacactcttttttaggactgagatgcataaggattctgtt
caaggaggaagaatctacatgggggccttgttttttggtatgactatgattatgttcaat
ggaatgtctgagctttctatgaccatttccaagcttcctgtcttttacaagcaaagagac
ctcctattctttccttcatgggcctatgctttaccatcatggatactgaagatccctatc
acatttttagaagtttctatatgggtatttattacctactatgtcatcggatttgatccg
agtgccgaaaggttctttagacagtacctcatccttgttctcactaaccagatggcttca
ggattatttcggtctattgcagcaatcggtagaaacatgattgttgctaacactttcggg
tcatttgctttactcgtactttttgcgttgggtggcttcgtcctgtcacgagaggacata
aagggttggtggatatggggttactggatttcaccaatgatgtatgggcaaaatgcattg
atggctaatgagttccttgggcaccagtggagtcgagtccttccgggttcaaacgtatca
ctaggagttgaagttttaaattccaggagtttcttcccagattcatattggtattggatc
ggagtagggggattgattggcttcgtattattgttcaactttgtctttactgtggctctt
tcctatctagccccctttgagaagaataaggccgtaatatcagatgaacctgaaagcgac
gatcaagtcaatggggctggagttggtggaagcattcagttaacaaaccaagaaagcagc
tcaagtcatgtaaacagatcagagatccaagatgacattcaaagaagcacctcatccatg
tccttttctatgagtgatgcaacagttggggccaacggcaaagggaaaaagggaatggtt
cttccatttgagccacattccatcacttttgatgacattgtgtattctgttgatatgccc
caggaaatgaaagaacaaggtgtccctgaagatagattggtgttattgaagggtgttagt
ggtgctttcagacctggcgttctcacagctctcatgggtgttagtggtgctggtaaaacc
actctgatggatgtgcttgcaggcagaaaaactggtggttatatcgatgggaacattaca
gtttcaggtttccccaagaaacaagagacatttgctcgagtatctggatactgtgaacaa
aatgacattcattctcctcatgttactgtgtatgaatccttgctttattccgcttggcta
cgattgtccagtgaggttgatgctcaaactagaaagatgttcatcgaggaagtcatggag
cttgtggaactgaaaccattaaggcatgccctagttggtatacctggtgtaaacggttta
tcaactgagcagcgaaagaggcttaccattgcagtcgagcttgtggcaaacccctccatc
attttcatggatgagccaacttcagggcttgatgcaagagctgctgcaattgtcatgaga
acagttaggaatacagtggacactggaagaacagttgtgtgtaccatccatcaaccaagt
attgacatatttgaagcatttgatgagctattccttatgaagcgtggaggacaagagatc
tatgtggggccattaggacaccattctagacatcttatcaaatattttgagggaattcaa
ggagttagcaaaatcaaagatggctataatccagctacttggatgttggaagttacctca
acagcacaagagttatctttaggcgtcgattttgctgaaatctacaaaaagtcagaccta
tacaggagaaacaaagctcttattgaagatttaagtaaaccagctcctggtgcaaaggaa
ctctatttcgcaacacagtactctcaatcattcttgactcagtgtacagcttgtttatgg
aagcaacactggtcatactggcgcaaccccccatatactgctgtgagatttctctttaca
accgtcatagcattgatgtttgggacagtgttctgggaccttggttctaaaacgaaaaga
atacaagatctgtccaatgcaatgggttcaatgtatgctgctgttcttttccttggtatc
caaaacgcttcttctgtgcaacctgttgtggcggtcgaaaggacagtcttttatagagaa
agagctgctggaatgtactctgcaatgccatatgccattgcacaggtgttaatagagata
ccatatatttttgttcaagcttctgtgtatggccttatagtctatgctatgatcggattc
gaatggacggttgctaagttcttctggtatctcttcttcatgttcttcaccttactttac
ttcaccttctacggcatgatggctgttgctgtcacaccaaatcattacatcgcagccata
gtttccgcggcattctacggagtatggaatctcttttcaggattcatcatcccacgacct
agtatgccaatatggtggaggtggtactactggatttgtccggtttcttggaccttgtat
ggattggttgcttcacagtttggagatataacacacatgcttgaagatgggaacaatgag
acagtggagcagtacttgagaaatttttatgatttcaggcatgattatctgggattagtt
gctgctgtgattgttagttttgcagttctctttggagcaatctttactgtgtccataaag
atgttcaatttccaaagacgttag
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