Gossypium arboreum (tree cotton): 108453177
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Entry
108453177 CDS
T05776
Name
(RefSeq) AP3-complex subunit beta-A isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108453177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108453177
Membrane trafficking [BR:
gab04131
]
Endosome - Lysosome transport
Others
AP-3 complex
108453177
Endosome - Golgi transport
108453177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C
AP3B1_C_2
HEAT_2
INTS1_R4
Svf1_C
Motif
Other DBs
NCBI-GeneID:
108453177
NCBI-ProteinID:
XP_017606614
UniProt:
A0ABR0Q202
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Position
5:complement(38924530..38933606)
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AA seq
1135 aa
AA seq
DB search
MFPQFGATAETLSKASTMVFRIGTDAHLYDDPDDVSIAPLLDSKFDSEKCEALKRLLALI
AQGFDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPL
VRAWALRTMAGIRLHVIAPLVLVAVGKCARDPSVYVRKCAASALPKVHDLRLEEHTLAIE
EIVGMLLNDRSPAVVGAAAAAFASVCPYNLSLVGRNYRKLCEILPDVEEWGQIVLIGILL
RYVIARHGLVKESIMFSLQYTESSHSAKDGSDVDFGLVKESTDLSGTCDSEFLNTISRCY
MEGPDEYLSRSSYANRESFELNGAQFTSGKSNDDVKILLYSTSPLLWSNNSAVVLAAAGV
HWVMAPKEDVKRIIKPLLYLLRSSNASKYVVLRNIQVFAKAMPSLFAPYFEDFFIFSSES
YQIKALKLEILSYIATDSSISSIFKEFQDYIRDPDRRFAADTVAAIGLCVQRLPKMAHIC
VDGLLSLTRQEFVTKDFGFEDQEAGILTQVIMSIKSIIKKDPPSHEKVIIQLVRSLDSVK
VPAARAMIIWMVGEYSSLGEIIPRMLTTVLKYLAWGFPSEAPETKLQILNTVCKVLEGAT
GDDLWTFKKIFSYLIELAECDLNYDLRDRTRLLKKLPSCNLVSLGLEEGTNDLPGNDLLH
IVAECILGRQTRKVKPKSFSYRYYLPGSLSQIVLHAAPGYEPLPKPCSLLLDDLNVAEGT
SEMKRAADYSGTDDYGSSSDPSDEESASDYDSQRSVTESSGGDHGDDSEFTSEGNDNADP
LIQISDIGNASENQNGVSQSSPANLGELMSNRALESWLDEQPGSSNPCLPKQSQVRISSA
RISVGDVGKQVKQKSYSLLDPASGNGLKVDYSFSSEISSISRLLVCIEVFFKNCSSEIIS
EITLVDEESNRAFDSADKTAVVNESPLTSSDDVPTLVPMESIVSLEPGQTTRRILQVRFH
HHLLPLKLALYCDGKKLPIKLRPDIGYFVKPLPMDVEVFIDKESHLPGMFEYARSCTFTD
HIVELNEENGDSLLVKDKFLAICESLALKMLSNANLCLVSVDMPIAANLDDASGLRLRFS
SEILSSSIPCLITIGVEGKCTDPLNLSIKVNCEETVFGLNLLNRIANFLVEPTLS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtttccacagttcggagcgactgcggagacgttgagcaaggcgtcgacgatggtgttc
cggatcggaaccgatgctcacctctacgacgatccggatgacgtcagcatagctccgctt
ttagatagcaaattcgattcggagaagtgtgaggctctcaagcgactcctcgctctcatc
gctcaaggcttcgacgtctccaattacttccctcaggttgttaaaaacgtggcatctcaa
tctttggaagtaaagaaacttgtttatttgtatctactgcattatgctgaaaagcgtccc
aacgaagcattgttgtcaattaattgtttccagaaggatttgggggaccctaatcccttg
gtgagagcatgggcacttcgcaccatggctggaattcgtcttcatgttattgcacctctt
gttctggtggctgtgggcaagtgtgctagagatccatctgtctatgttagaaaatgtgca
gctagtgctcttccaaaagtacatgatttgcgcctagaggaacataccttggcaattgaa
gagattgttgggatgttgttaaatgaccgctcccctgccgtagttggtgctgctgctgct
gcatttgcttctgtttgtccatataatttatctttggtcgggaggaattatagaaagtta
tgtgagattcttcctgatgtggaagagtggggtcagatagtcttgattggaattctttta
cgctatgttattgcaaggcatgggctagtgaaagaatccattatgttttctctgcaatat
actgagagctcacattctgcaaaagatggttcagatgttgactttggactagttaaggaa
tccactgacttgagtgggacatgtgattctgaatttttaaacacaatttccaggtgctat
atggagggtccggatgaatatttatctaggtcaagttatgccaacagggagtcctttgaa
ttaaatggtgcacaatttacatctggaaaaagtaatgatgatgtcaagatcctgctttat
tctacatctcccctgttatggagtaacaacagtgctgtggtactagcagcagctggtgta
cactgggttatggcaccaaaggaggatgttaagagaatcattaaaccactcttgtatttg
ctgagatcctctaatgcctcaaaatatgtggttctacgcaacattcaagtgtttgctaaa
gcaatgccttctctctttgctccatactttgaggacttcttcattttctcttctgaatca
tatcaaatcaaagccttgaagcttgagatactttcttacattgctacagattcatccatt
tcttctattttcaaagagtttcaggattatattagagatccagacaggcgattcgctgct
gatacagttgctgcaattggtctatgtgtgcaacggcttccaaaaatggcacatatatgt
gtagatgggctgttgtctctgactagacaggagttcgtgacaaaagattttgggtttgaa
gatcaagaagctggtattttgactcaggttattatgtctataaaatcaatcataaagaaa
gacccaccaagtcatgagaaggttataattcagttggtccgcagtttggattcagtcaag
gtgcctgcagctcgtgcaatgattatttggatggttggagaatatagctctttgggtgag
ataattcctaggatgttaaccacggtgctgaagtatcttgcatggggttttccttcagaa
gcaccagaaacaaagcttcaaattcttaacacagtgtgtaaggttctagaaggtgcaaca
ggagacgatctgtggacattcaagaaaatattcagctatttgattgaattggctgaatgt
gatttgaactatgatcttcgtgaccgaactcgtttattgaagaaacttccatcatgcaac
ttagtctctctaggactggaggaaggaacaaatgatcttcctggaaacgaccttctgcat
atagttgctgagtgcatattaggaagacaaacaagaaaagtgaaacctaaatcatttagt
taccggtattatctgcctgggtctctctcgcagatagttcttcatgcagctccagggtat
gagcctctcccaaagccttgtagtttgctccttgatgacctcaatgtggctgaaggaacg
agtgaaatgaaaagggcggccgattacagtgggacagatgattatggctcatcatcagat
ccttcagatgaggaaagtgcttctgattatgattctcaacgctcagtcactgaatctagt
ggcggtgatcatggcgatgacagtgaatttactagtgaaggaaatgataatgcagatcca
ttgattcagatttcagacatcggcaatgcttctgaaaatcagaatggagtttctcagtct
tctcctgctaatctgggggaattgatgtcgaatagagctctggagtcatggttggacgaa
cagcctggttcatcgaacccatgcctgccaaaacaaagtcaagtccgaatatcatcagca
agaatatctgttggggatgttggaaagcaggttaaacaaaaaagttattcactgttagac
cctgctagtggaaatggtttgaaggtggattattctttttcatcagaaatatcaagtata
tcccgtctacttgtatgcatagaagttttctttaagaactgttcatcagagattatatca
gaaataaccttggttgatgaggaatctaacagagccttcgattctgctgacaagactgct
gttgtaaatgagagccccttgacatcctctgatgatgtgccaacactagttccgatggag
tcgattgtttctttagaacctggtcagacgacaagaaggattcttcaagttcgctttcat
caccatctattgcctttgaagctagctttatattgtgatgggaagaagcttccaattaag
ttgcggcctgatattggatattttgtaaaacccttaccaatggatgttgaagtcttcatc
gataaagaatctcatctcccagggatgtttgaatatgcaaggagttgcactttcactgac
cacattgtggagctaaacgaggagaatggggatagcttgttagtcaaagacaaatttctt
gcaatttgtgagagcttagctctaaaaatgcttagcaatgcaaatctttgtctcgtatct
gtcgatatgcccattgctgctaacctagatgatgcatcgggtttgcgcttacggttcagc
tctgaaatcttgagtagttcgattccttgtttaattaccattggcgttgaaggtaagtgc
actgatccattaaacttatccattaaagtaaactgtgaagaaactgttttcggcctaaat
ctgttgaacagaatagcaaatttcttagttgagcctaccctttcttaa
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