Gossypium arboreum (tree cotton): 108453180
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Entry
108453180 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108453180
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108453180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108453180
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-60S particles
GTPases
108453180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
SRPRB
Motif
Other DBs
NCBI-GeneID:
108453180
NCBI-ProteinID:
XP_017606624
UniProt:
A0ABR0MUR6
LinkDB
All DBs
Position
12:116077754..116081657
Genome browser
AA seq
1027 aa
AA seq
DB search
MGDADTRKVRNICILAHVDHGKTTLADHLIAATGGGVLHPKLAGKLRFMDYLDEEQRRAI
TMKSSSIALHYKHHEINLIDSPGHMDFCSEVSTAARLSDGGLVLVDAVEGVHIQTHAVLR
QSWIEKVTPCLVLNKIDRLICELKLSPMEAYNRLLRIILEVNGIMSTYKSEKYLSDVDSI
LAGPSGEVTDENLESIEDDEEDTFQPQKGNVAFVCALDGWGFTINEFAEFYASKLGASTS
ALQKAFWGPRYFNPKTKMIVGKKGLSAGSKARPVFVQFVLEPLWQVYQAALEPDGDKGTL
EKVIKSFNLSVPPRELQNKDPKIVLQAVMSRWLPLSDAVLSMVVKCMPDPISAQSYRISR
LLPKREILDKGVDSNVLAEADLVRKSVEACDSSPEAPCIAFVSKMFAVPTKMLPQRGPQG
EILNNFTDEGGTSESDECFLAFARIFSGVLTSGQRVFVLSALYDPLRGKSMQKHVQEAEL
QSLYLMMGQGLKPVTSARAGNIVAIRGLGQHILKSATLSSTRNCWPFSSMAFQVSPTLRV
AIEPSDPADMGALMKGLRLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCVKDLKERFAK
VSLEVSPPLVSYKETIEGDLSNALEDLKLFTADSDYVEKVTSNGRCTIRVKVLKLPPTLT
KVLDESADLLSDIIGGKLGQSGKSLEMHALSLSENESPIEVLRKRMVDALESDFLCGNEN
DKDQAEKCKGKWLKLLRRIWALGPRQVGPNILFTPDYKTENNDGTSLIHGSPYVSLRLGL
ADNSTASDIAAIASSELTQPLYGEAESLESSLMSGFQLATAAGPLCDEPMWGLAFVVEAY
ISPSAVQAGESEPNQQSEQYGLLTGQIMTAVKDACRGAVLQRKPRLVEAMYFCELNTPTE
YLGPMYAVLARRRARVLKEEMQEGSPLFTVHAYVPVSESFGFADELRRWTSGASSALLVL
SHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLINAVRRRKGLPVEEKVVQHATKQ
RTLARKV
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgctgatactagaaaggttaggaatatatgcatattagcacatgttgatcat
ggtaaaaccacgttggctgatcatttaattgccgccacaggtggtggcgtgcttcaccct
aaattagctggtaaacttaggtttatggattatcttgatgaagaacaaaggagagcgata
acgatgaagagttcttctatagctcttcattataaacaccatgagattaaccttatagat
tcccctggtcatatggatttttgtagtgaggtgtctactgctgcacggttgagtgatggt
gggttggttttggttgatgcggtcgagggtgttcatattcaaactcatgcggtcttgcgt
caatcttggattgagaaggttaccccgtgtttagttcttaataagattgataggttgata
tgtgagttgaagttgagccctatggaagcttataatcggttattgaggattattcttgag
gtcaatgggattatgagtacgtataagtcggagaaatatttatctgatgttgattccata
cttgctggcccttctggcgaggtaactgatgagaatttggagtctatagaggatgacgaa
gaggatacttttcagcctcaaaaaggaaatgtggcatttgtgtgtgctttggatgggtgg
ggtttcacgattaatgagtttgctgaattctacgcttctaagcttggggcaagtacatct
gcacttcagaaggctttctggggtcctcgctatttcaatcccaagaccaagatgattgtt
gggaagaagggattaagcgcaggaagtaaggcaaggccagtgtttgtgcagtttgtcctt
gaaccactttggcaggtttaccaggctgctttggagccggatggggacaaagggacactt
gagaaagtgattaagtcttttaatttgtctgttcctcctcgtgaattgcagaataaggac
cccaagattgtgcttcaagctgtcatgagtagatggcttcctttgtcagatgcagttttg
tcaatggtggtgaagtgtatgccagatccaatttctgctcagtcttacaggatttcacgt
ttgcttcccaaaagagagattcttgataaaggggtggactctaatgtgcttgcagaggct
gatctagtgagaaagtcagttgaagcttgtgattctagccctgaagcaccgtgtattgct
tttgtgtctaagatgtttgcggttccgacaaagatgcttccccaacgaggtcctcaaggg
gagattttaaacaatttcactgatgaaggtggaactagtgaatctgatgagtgcttcctt
gcatttgctaggatctttagtggggttcttacatcaggacaaagagttttcgtgctttca
gctctatatgatcctttgagagggaaatcgatgcagaagcacgtgcaggaagctgaattg
cagtccttgtatttaatgatgggtcagggtctgaaaccagtgacctctgcaagggctggg
aatattgtggcaattcgtggacttggccagcatatattaaagagtgcaactctttcgtct
acaagaaactgttggcctttctccagtatggcatttcaggtttcccctaccctaagggtt
gcaattgaaccctctgatcctgcagatatgggtgctcttatgaaaggtctgaggcttctc
aaccgagctgatccatttgttgaggtcactgtttcatctaggggggaacatgtgttagcc
gctgctggtgaggttcatctagaaagatgcgtcaaggatttgaaggagagatttgcaaag
gtgagcctggaagtctctccacctcttgtctcctataaagagaccattgagggtgatttg
tctaatgcattggaggatttgaaactttttactgctgactcagattatgttgaaaaagtg
acttcaaatggaagatgtaccattcgtgttaaagtcttgaaacttccacctacactaacc
aaggtgcttgatgaaagtgctgatttgctctcagatattattggaggtaaactggggcag
agtggtaaaagcttagaaatgcatgcgttaagtctgagtgaaaatgagagtccaattgaa
gtactcagaaaacgcatggtcgatgctctggagagtgattttttgtgcggaaatgaaaat
gacaaggatcaggctgaaaaatgcaaaggtaaatggctcaagcttcttaggaggatctgg
gctcttggtccaaggcaagttggtcctaacatccttttcactccagattacaaaacagag
aataatgatggcactagtctgatacatggctctccttatgtgtctctgagactgggtttg
gctgataattctactgctagtgatattgctgctattgcatcttcggaactgactcaacca
ctgtatggagaagcagaaagtctggagagtagtctgatgtctggatttcaactggctact
gcagctgggcccttatgtgatgagccaatgtggggattagcatttgtcgttgaagcttat
atctctccctcagctgttcaggctggtgagtcagaacctaaccaacaatctgagcagtat
ggccttcttactgggcagataatgacagctgtgaaggatgcctgtagaggagctgtgctt
cagaggaagcctaggcttgtcgaagccatgtacttttgtgagttgaatactccaacagag
tatttgggccctatgtatgcagttcttgcacggaggcgagcccgagttttgaaggaagaa
atgcaagaaggctctccactttttacagtgcatgcctatgtgccagtttctgaaagtttt
ggttttgctgatgagctaaggagatggacatctggggcttctagtgcccttcttgtgctt
agtcactgggaagcacttcctgaggatccattttttgtaccgaaaacagaagaggagata
gaagaatttggtgatggttctagtgttcttccaaatacagcaagaaagctcattaatgct
gtgaggcggcgaaagggtttgcctgtagaagaaaaagtagttcagcatgcaacaaagcag
aggacgctagctcgtaaagtgtaa
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integrated database retrieval system
