KEGG   Gossypium arboreum (tree cotton): 108453192
Entry
108453192         CDS       T05776                                 
Name
(RefSeq) splicing factor U2af large subunit A-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108453192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108453192
Spliceosome [BR:gab03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108453192
 Complex B
    108453192
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 108453192
NCBI-ProteinID: XP_017606642
UniProt: A0A0B0NG22
LinkDB
Position
5:complement(35437581..35442841)
AA seq 576 aa
MTDYEEPRYQGNGDNLENSYGGGSSPKSRSDDQNDSKYQDYERESSKSREKEREKGRDKE
RDKDRDRHRDRDRDKDRDRDREKDRDRERHHRDRHRDRSRERSERRDRGRDRDDDDYYRS
RDNDRRRDYDRDREDRHRRRSRSRSERRSKSRSPSRSRSRSRSRSRSKSKRISGFDMAPP
ASAMLAAGAVAAAAAGQIPGTTNPTIPGVFPNMFPIATGQPFGALPVMPVQAMTQQATRH
ARRVYVGGLSPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE
EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEG
PDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIAC
AALNGIKMGDKTLTVRRANQGATQPKPEQESILQHAQQQIALQRLILQPQGVPTKVVCLT
QALNVDDLRDDDEYEDIVEDMRQEGGKYGALVNIVIPRPNPNGEPAPGVGKVFLEYSDVE
GSKKAQAAMNGRKFGGNQVIAVYYPENKFAQGEYDG
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgactgattacgaagaaccacggtatcaaggaaacggagataacctcgaaaacagttat
ggcggaggttcttctcctaagtctcgttccgacgatcaaaacgattctaaatatcaggat
tatgagagagagtcttctaaaagcagggaaaaggagagagagaaagggcgtgacaaggaa
agggacaaggaccgtgatcgccacagggatagggatagagataaggatagggatagggac
cgagaaaaggatcgtgatcgtgaacgccatcacagagatcgtcatagggatcgtagtagg
gaacgcagtgagagaagggatcgaggaagagatagggatgatgatgattattaccgcagt
cgagataatgacagaagaagggactatgatagagacagggaggataggcataggcgccgg
tcaaggagtagatctgagcgcagatcaaagtcaagatctccttctcggtctcggtctcgc
tcacgctcacgctcacgctcaaagagcaaaaggattagtggttttgacatggcccctcca
gcttcagcaatgttagctgctggtgctgtggcagctgctgctgcagggcagattccgggg
acaactaacccaaccatacctggagtgtttcctaacatgtttcctattgcaactggacag
ccatttggtgctctcccagttatgccagttcaggcaatgactcagcaggctactaggcat
gctcgtcgggtgtatgttggagggctttctcctactgctaatgaacagtctgttgcaact
ttcttcagccatgttatggctgcaattggtggaaatactgctggtccaggggatgctgtt
gttaatgtctacataaaccatgaaaagaagtttgctttcgtagagatgagatctgtagag
gaggctagtaatgcaatggccttagatgggattatctttgagggagcacctgtgaaggtg
aggagacctagtgactataatccgtcgcttgctgcaacacttggtccaagccagcccaat
ccgaatctaaatctagctgctgtgggtctaacgccaggttctgctggcgggcttgagggc
cccgaccgcatatttgttggtgggcttccatattacttcacagaagcacagattagggag
ttattggagtcttttgggcctcttcgaggttttgatctagtaaaagatagagaaaccggg
aactctaaaggctatgcattttgtgtttatcaagacctgtcagttacagatattgcttgt
gctgctctaaatggaattaaaatgggtgataaaacgctcactgttaggcgagcaaaccag
ggtgctacccagcctaaacccgagcaagagagtatactccagcatgcacagcagcagatt
gctttgcagaggctaattttgcaaccacaaggtgtgccgacaaaggttgtgtgtttgact
caagcgcttaatgttgatgatctcagagatgatgatgagtacgaggacattgtggaagat
atgagacaagagggtggaaaatatggtgcattggtgaatattgtcatcccacgcccaaat
ccgaatggagaacctgccccaggtgtcgggaaggtatttctggaatactcggatgttgaa
ggttccaaaaaggctcaagctgcaatgaatggtcggaaatttggcggaaatcaagttatt
gccgtctactatccagaaaacaagttcgcacaaggggaatatgatggctaa

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