Gossypium arboreum (tree cotton): 108453207
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Entry
108453207 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108453207 isoform X1
KO
K23288
syndetin
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108453207
Membrane trafficking [BR:
gab04131
]
Protein recycling
Others
EARP complex
108453207
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
108453207
NCBI-ProteinID:
XP_017606671
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All DBs
Position
5:6321544..6335417
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AA seq
1111 aa
AA seq
DB search
MQQPNLFPFGSVLGNPFLLNGGVGDLSDGGFDSSRVFFLVPFLLFQGGGMDLSKVGEKIL
SSVRSARSLGLLPSSPSSDRPEVPARAAAAAAVARALSGLPPDQRYSLPSSSEELMSIYG
SKPQSQIVEDIEEKFYEEEFDPIKHVLEHIPSEENELEYFEKQATLRLAQLDRVAEQLSR
NVMEHHEVMVKGMNLVRELEKDLKIANVICRNGRRHLTSSMNEVSRDLVVNTDSKKKQAL
MHLLPVLAELLHARDMQVSLESLVEEGNFCKAFQVLSEYLQLLDSFSELSAIQEMSRGVE
VWLGRTLQKLDSLLLGVCQEFKEEGYLTVVDAYALIGDISGLAEKIQSFFMQEVISETYS
VLKSIILYEVILMLREYDSSEDQDVQMQNSRLTYSDLCLQIPESKFRQCLLRTLAVLFKI
MCSYHEIMGFQLENKVLECPAINAKLMKGGTPGSSSIKESTTATSSADTSGRMDSGNVES
DKPVSDGRNGDGATSSSGSPWYQLRKEAITFVSQTLQRGRKNLWQLTTSRVSVLLSASAA
ASTSIHQFLKNYEDLSTFILAGEAFCGVEAFEFRQKLRGVCGNYFAAFHRQNVSALKMVL
ERETWLRLPPETAQIISFAGLVGDGAPLIAASDGRSSNSRVLRADKSANKVDTGAKKSGF
SPWLRNGNPFLLKVSSSHKEAHNSSPLNGTTSVEYEGNADNIHGDVSPHGDENHINGANS
ISEEENEDLLADFIDEDSQLPSRISKPNLSRSCSPHFSNDDFTAQTGSSLCLLRSMDKYA
RLMQKLEIVNVEFFKGICQLFEMFFYFVFETFGLQNMNSSGKTSTDSLNYRLKTALSQIT
QDCEEWIKTSSGPLSSSTAHADLTPTAPQNTNFGSPAGTSFGLKERCAGADTVALVARIL
HRSRTNLQSLLLKSNTAIVEDFFVHLVGAVPDLVEHIHRTTARILLHINGYVDRIANAKW
ELKELGMEHNGYVDLLLGEFKHYKTRLAHGGIQKEVQDLLLDYGLEIVAETLIEGLSRVK
RCTDEGRALMSLDLQVLINGLQHFVSINVKPKLQIVETFIKAYYLPETEYVHWARAHPEY
SKNQIVGLINLVASMKGWKRKTRLEVLEKIE
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgaatctgttcccgttcggcagcgttttggggaatccgtttttgttgaat
ggcggcgttggcgatttaagcgacggtggatttgacagctctagggttttctttttggtc
ccttttttgttattccaaggaggtggaatggatttgtccaaggttggggagaaaatcctc
agctccgtgcggtccgcgcgatcacttggtctcttgccttcttctccttcttctgatcgg
cccgaggttccagctcgagctgcagcagcagcagctgttgctcgtgctctttcaggattg
ccacctgatcagagatatagtcttccatcgagttctgaagaactgatgtcaatatatgga
agcaaacctcagagtcaaatagtagaagacatagaggaaaaattctatgaggaggagttt
gatccgataaaacatgtcttggagcatattccttctgaagaaaatgaactagaatatttt
gagaaacaggccacacttagattagctcaactggatagagtagcagaacaattatcccgc
aatgttatggagcaccatgaagtaatggtgaagggtatgaatttggtcagggaattggag
aaagacttgaagattgcaaatgtcatctgcaggaatggcagaaggcatctgacatcatca
atgaacgaggtttctagggaccttgttgtgaatactgattctaagaagaaacaggctctt
atgcacttgcttccagtactagctgagcttcttcatgcacgggacatgcaagtatccctt
gagtctctggtcgaggaaggtaatttctgcaaggcatttcaagtactatccgaatattta
caactactagatagcttctcagagctttcagcaatacaagagatgagccgtggggttgag
gtttggctaggaagaactcttcaaaagctggactcgctcttgttaggagtttgtcaggag
tttaaagaagaaggctatttaactgtggttgatgcttatgctttaataggagatatctct
ggtcttgctgagaagatacaaagttttttcatgcaagaagttatctcagaaacctactct
gtcttgaagagtattattctctatgaggtaatattgatgttgcgggaatacgatagttca
gaggaccaagatgtacaaatgcaaaatagcagacttacctacagcgatctatgccttcag
atacctgaatctaagtttagacagtgtttgttaaggacactagctgtcctgttcaaaata
atgtgttcatatcatgaaatcatgggctttcagctggagaataaggttttagagtgccca
gcaataaatgccaaattgatgaaaggcgggacaccaggttcatcttccataaaggagtct
acaacagccacttcctcagctgatacatctggaaggatggattctggaaatgtagaatct
gataaaccagtttctgatggtagaaatggcgatggtgctacatcaagcagtggatctcca
tggtatcaattaaggaaagaagccataacttttgtgtcacaaactcttcagaggggacga
aagaatctttggcaacttacgactagccgagtgtcagtactgctgtctgcttctgctgct
gcttctacaagcattcatcaatttttgaaaaactatgaagatcttagcacattcatcttg
gctggggaagccttctgtggagttgaggcttttgagttcaggcagaaactgaggggtgtc
tgcggaaattattttgctgcatttcatcggcaaaatgtatctgcacttaaaatggttttg
gagagagaaacctggcttagattgccaccagagacggcacaaataattagttttgctggg
ctagtaggtgatggagcacccttaattgctgcctctgatggtaggtcttctaattctagg
gtgcttcgcgctgacaaatcagcaaacaaagttgacacgggtgccaagaagagtggattt
tctccttggcttagaaatggaaacccatttttgctaaaagtaagctccagtcacaaagag
gctcataattcctccccacttaatggaacaacctctgttgaatatgagggaaatgctgat
aatattcatggtgatgtctctccacatggtgatgaaaatcatatcaatggtgccaattcc
atctcggaagaggaaaacgaggatttacttgctgactttattgatgaggatagtcaactc
cctagtcgaatttcaaaacccaacctttcaagaagttgctctcctcatttcagtaatgat
gattttacagcacaaacaggatcatctctttgtcttctgaggtcaatggataagtatgca
agattgatgcagaaacttgaaatagtaaatgttgagttttttaagggcatatgccagtta
tttgaaatgtttttctattttgtatttgaaacatttggtctgcaaaacatgaattcgagt
ggaaagacttcgacggactctcttaattatcggttaaagactgccttatcacaaataacg
caagattgtgaagagtggataaaaacttcatcaggacccttatcatcttcaaccgcacat
gcagatttgacacccactgctcctcaaaatacaaattttggttctccagcaggcacctcc
tttggtctaaaggaaagatgtgcaggtgctgatactgtagctcttgtagctcggatattg
catagatctagaactaatctccaatcattgctattaaagagtaatacagctatagttgag
gatttctttgtgcacctggtgggtgctgtgccagatcttgtagagcacatacataggaca
actgccagaatactgcttcacattaacgggtatgttgatcgaattgctaatgcaaaatgg
gaattgaaagagcttgggatggagcacaatgggtatgtggatttgttgttgggagaattt
aagcactacaaaacaaggcttgctcatggaggaattcagaaagaggttcaagacctccta
ttggactacggactagaaattgttgcagaaactcttattgaaggtctatcacgagtgaag
cgatgcactgatgaaggacgagctctcatgtcattagaccttcaggttttaatcaatggc
ctacaacactttgtctccataaacgtgaagccaaagttacagattgttgaaactttcatc
aaggcttattatctccctgaaactgaatatgtacactgggcacgagctcatccggaatat
agcaagaatcagattgtggggttaataaaccttgttgcttcaatgaaaggttggaaaaga
aaaaccaggttggaagttctggaaaagatcgaatga
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integrated database retrieval system
