Gossypium arboreum (tree cotton): 108453229
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Entry
108453229 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108453229 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108453229
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gab04812
]
108453229
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
108453229
Cytoskeleton proteins [BR:
gab04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
108453229
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
108453229
NCBI-ProteinID:
XP_017606708
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Position
5:5495182..5507976
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AA seq
1240 aa
AA seq
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MAVEANFASLFEKLKVEDPWLPPRTWESIPSQSGPLPPLPNSQPPISSSSSVSEATLVRL
ALNALQGVESSLCSIEKLSAAFFSDPADRTFHQTPSLWYRSSSTHALGKILKSIGRSGFL
VFLLHKFVEYFTNLNLNGNSFSLRKGWENSQATDNQNHGGHKVQEEEGPKYSLVNQAFSV
AVGKVLEGYICALDTLYASVNVRHSKSTEVSTGVSSGCLTSVVYSGITLLEVYLHTKELR
TQIEALGNICNLHDLALCFLESSFEELSYKATMGFHKFFRGGDLLSYLYTQLKVADPAHH
ALFKFLFLRSCEPYCEFIRSWIFKAEINDPYKEFVVEYIDTLQHRSAGKDGIPIDFPVAN
ITERDGVVVPCFLKDLLTPLIRAGQQLQVLMKLLELREHVDTGDHTYLDFLPCWSGFAGS
NPFYASSITFGKENIEALVLMRNSYYERMEEKLENLLTGLEFNCQQVFSHRAEPHLFGTS
GDTPNIVASLTVDDKLVINSTMKRSFSNVSLDNNDFDDSSTKDGSSHEADIFEPFESSSM
SSFEEHTESEQLIEHSNNLVWPKQNYFSALSFSVSTPFGNSLQLALQNGQSDRMESSLQA
GTGGHGNFIGCEPNGINDHLSPHLESNWLCAEVESANILTSKGWPVNSARNNAFCIDGDD
RDDKRSHLCDSDIKMRKCNTQFFDKFVQHFNESIAINNTSAVDTSNEVQHEKDSTSGLFQ
LQQFKLTYNGSLLSKNPMLTNNSFFRMMSKTGVASRIDHQQTLPYFDFSSVDDPCMVYVE
RLSSGFTHEFPENTSSVTNGRGNQDDKQGYGDVLLVDNSKSSYAVPPLELRNQTQDVIST
TVSGSSYWESLLGSFSNPNSSGTIDMKLNTSSTFEIPLDFVIDKCLLQEILLQYNYVSKL
TIKILEEGFDLQEHLLALRRYHFMELADWADLFIMSLSHHKWCVTEVDRRHSEIQGLLEL
SVQRSSCERDPHKDRLFIYAKGHGLLPLSTSTIGVHSFDFLGLGYRVDWPISIILTPAAL
KIYADIFNFLIQLKLAVFSLTDVWCSLKDIVHLICQKRHPTLHEREVGHFNKLMKLRHQV
NHFVSTLQQYVQSQLSHVSWCKFLHSFKHKVKDMMDLESVHMSYLTDSLHICFLSDETKP
IASTIENILQCALDFRSCLTGDIWNVGLAEGDLQDKLSKINISQVLGIKETFDKNLKELH
LLYLKSPKHGESGLSCFWGYLNYNDYYVNENEMSYYAFSI
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaggcgaatttcgcatcgttgtttgagaagctgaaagtggaagatccatgg
ctccctcctcgaacctgggaatccattccttctcaaagcggcccccttcctcctcttcca
aactctcaacctcccatttcctcctcttcatcagtctccgaggcaactttggtgaggttg
gcactaaatgcactgcaaggcgtagaatcatctctttgtagcatagaaaaactttctgct
gcctttttttccgatcctgcggataggactttccaccaaacacctagtctttggtaccgg
tcttcaagcactcatgctttggggaagattctcaaatcaataggccgttcaggtttctta
gttttccttctccataagtttgtagaatattttacaaatttgaatctcaatggaaattca
ttttcactacggaagggctgggaaaattctcaagcaacagacaatcaaaatcatggtggc
cacaaagtgcaagaggaagagggccctaaatatagccttgttaatcaagcattctctgta
gctgtaggaaaggttttggaagggtacatttgtgcgttggacacattatatgcatcagta
aatgtaaggcattcaaagagtactgaagtctctacaggtgtatcttcaggctgtctcaca
agtgtggtttactctggaattacgctattggaggtatacctgcacacaaaggaattgagg
acccagattgaagctcttgggaatatatgcaatcttcatgatttagctctttgcttcttg
gaatcttcttttgaagaactaagttataaggcaaccatgggatttcataaattctttagg
ggaggtgacctgcttagttacttgtatacacagctaaaggttgcggaccctgctcaccat
gctttattcaagtttctttttcttcggtcatgtgaaccttattgtgagtttataaggtcc
tggatttttaaagctgagattaatgatccttataaggagtttgttgtagagtacattgat
acattacaacatcgttctgctggtaaagatggaatccctattgactttccggttgcaaat
attacggagcgggatggagttgttgttccatgtttcctgaaggatcttttgactccactt
attagggctggtcagcagcttcaagttctaatgaaattgcttgaattgcgtgaacatgtt
gatactggagaccatacttatttagattttcttccctgctggagtggttttgctggcagt
aatccgttttatgcttcttcaatcacttttggcaaagaaaatatagaagccttggttctc
atgcgtaatagttactatgagaggatggaggagaaacttgaaaatttactgacagggttg
gaattcaattgtcaacaggtattttcgcatagggctgaacctcatttatttggtactagt
ggagacactccaaatattgtagcttcactcacagtggacgacaaattggttattaattca
acaatgaaacgaagtttctctaatgtgtcgcttgacaataatgattttgatgactctagt
acaaaagatggatcctctcatgaagctgacatctttgaaccatttgagtcttcatctatg
agtagttttgaagaacatactgagtctgagcagttgattgaacactctaataatttagtt
tggcctaaacaaaattatttctctgccctaagcttttctgttagtaccccatttggaaac
tcattgcagctagctttgcagaatggacagtctgaccgtatggaaagcagtttgcaggct
ggaactggtgggcatggcaattttataggttgtgaacctaatgggataaatgatcacttg
tctccgcaccttgagtcaaactggttgtgtgcagaggttgaatctgcaaatattctcact
tccaaaggttggccagttaacagtgcaaggaataatgccttctgtattgatggtgatgac
agagatgacaaaagatcacatctatgtgattctgacataaagatgagaaaatgtaacacg
caattctttgataaatttgtgcaacattttaatgaatcaattgctatcaacaatacttca
gcagtggacacctcaaatgaggttcaacatgaaaaggactctacttcagggttattccaa
ttgcaacagttcaagcttacttacaatggtagccttctgagcaaaaatccaatgttgaca
aacaatagttttttccgtatgatgagcaaaactggtgttgcaagccggatagaccaccaa
caaactttaccttattttgatttttcttcagttgatgacccttgtatggtttatgtcgaa
aggctatcatctgggtttacacatgaatttcctgagaataccagttctgtgacaaatggt
aggggtaatcaggatgacaaacaaggttatggagatgttctcttggttgacaattcaaaa
agttcttatgctgttccacctttggagttaaggaatcaaacccaggatgtcatttcaacg
actgtttctggcagcagctattgggagagtttgcttggtagttttagcaaccctaatagc
agtgggactatagatatgaagctgaatacatcttccacatttgagataccccttgacttc
gtaattgacaaatgcctgctgcaggaaatcttgcttcaatataactatgtcagcaaatta
accatcaagatacttgaagaaggttttgatttgcaagaacatttgttagcactgcggcga
tatcattttatggaattggcagactgggcagatttgttcatcatgtccctttcgcatcat
aaatggtgtgttacagaggtggaccggagacactctgaaattcaaggacttcttgagttg
tccgtgcagaggtcatcttgtgaaagagaccctcataaagataggttatttatttatgca
aaagggcatgggttgttgcctctttcaacttctacaattggtgttcattccttcgacttt
ttaggtctgggctatcgagtggattggcctatcagcattattttgactcctgctgcattg
aaaatatatgctgatatattcaactttctgatacaactgaagcttgctgttttttcactg
actgatgtatggtgctcattaaaggatatagtgcacttgatctgtcaaaaacgccatcct
acactacatgaacgtgaagtgggccattttaacaagttaatgaagttgaggcatcaggtt
aatcattttgtatctacactacagcaatatgtacagtcacaactatcacatgtatcatgg
tgcaagtttcttcactcatttaagcacaaggtcaaagatatgatggatcttgagtcggtg
catatgtcatatctaactgattcactacatatatgttttctttctgatgaaacaaaacca
atagccagtaccatagagaatattttgcagtgtgccctagacttccggtcttgtcttact
ggggatatatggaatgtgggacttgctgaaggtgatttacaggataaactttctaagatc
aacatatctcaggttcttggcataaaagaaacgttcgacaaaaatcttaaagaactgcat
ctactctacctcaaatcacctaaacatggagaatctgggctttcgtgtttctggggatat
ctcaactataatgactattacgttaatgaaaatgaaatgagctattatgctttctcaatc
tga
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