Gossypium arboreum (tree cotton): 108453230
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Entry
108453230 CDS
T05776
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108453230
03036 Chromosome and associated proteins [BR:
gab03036
]
108453230
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108453230
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108453230
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108453230
microRNA pathway
RISC loading complex
108453230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108453230
NCBI-ProteinID:
XP_017606709
LinkDB
All DBs
Position
5:7721745..7728668
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AA seq
912 aa
AA seq
DB search
MDSFEQEGNGAALESLPPPPPVPPDVVPIKAESDAKKIVRHPMARRGVGTKGQKVTILTN
HFKVSVGSTDGQFYHYSVSLSYEDGRPVDGKGVGRKVIDRLHETYKNDLDGKNFAYDGEK
SLFTIGPLPNNKLEFTVVLEDVAPTRNNGNASPDGQDSPNGRERKRLRRPYHSKTFKVEI
SYAAKIPMQAIQNALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFQDNQNNFTD
IGGGVLGCRGFHSSFRATQGGLSLNIDVSTTMIIQPGPVVDFLLANQNARDPYSLDWNKA
KRVLKNLRIKVSPSNQEYKITGLSEQLCKDQLFSMKQKNAKNENGEAETLEITIYDYFVN
HRNIQLRYSADLPCINVGKPKRPTYIPIELCSLVSLQRYTKALSTFQRASLVEKSRQKPQ
ERMNVLSNVLRTSNYGAEPMLKSCGVNISSNFTQVDGRILPAPRLRVGNGEDFFPRNGRW
NFNNKKLVEPSRIERWAVVNFSAPRCDPNNIARDLIRCGEMKGIRIDPPFDIFNEMNQNR
RLSPVVRVEKMFEQIQSKLPGAPQFLLCLLPDRKNSDLYGPWKRKNLSEYGIVTQCMAPA
RVNDQYLTNLLLKINAKLGGLNSMLTIEQTPSIPMISKVPTIILGMDVSHGSPGQSDVPS
IAAVVSSRQWPLISRYRASVRTQSPKLEMIDSLFKPVSDKGDEGIMREALLDFYTSSGKR
KPDQIIIFRDGVSESQFNQVLNKELDQVIEACKFLDENWNPKFVVIVAQKNHHTKFFQQG
SPDNVLPGTVIDNKVCHPKNNDFYLCAHAGMIGTTRPTHYHVLLDQVGFSADDLQELVHS
LSYVYQRSTTAISVVAPICYAHLAASQLGQFMKFEDASETSSSHGGVTAPGAISVPQLPR
LKDNVSSSMFFC
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtttgagcaagagggaaatggggcagcgctggaatccctgcctcctccgcca
cctgtgcctcctgatgttgttccgatcaaagcagaatcggatgcgaagaagattgtacga
caccctatggcaaggcgtggtgttggaactaaagggcagaaggtaactatactcaccaat
cacttcaaagtgagcgtggggagtactgatggacagttctaccattacagcgtttccctt
tcatatgaagatggtcgccctgtggatggtaagggtgttggaaggaaagtgattgacaga
ttgcatgagacctacaaaaatgatttggatggaaagaattttgcctatgatggtgaaaaa
agtttatttactataggtccgttaccaaacaacaagcttgagtttactgttgtacttgag
gatgttgcacctaccagaaacaatggaaatgcaagccctgatggccaggacagcccaaat
gggcgtgaaagaaagagattaagaagaccgtatcattcaaagacctttaaagtggagatt
agctatgctgcgaagatacccatgcaagcaattcaaaatgctctgcgtgggcaggaatct
gaaaactctcaagaagcactgagggtgctggatatcattttaaggcagcatgctgctaaa
cagggatgcctccttgttcgccaatctttctttcaagataatcagaacaacttcacagac
attggaggaggtgtccttggctgtaggggtttccattcaagtttcagagccactcaagga
ggcctttcactaaatatcgatgtatcaactaccatgataattcaacctggtccggtagtt
gattttttacttgcaaatcagaatgctagagatccttactctcttgactggaacaaggca
aaacgggtgctgaagaatctgaggataaaagttagtccgtctaatcaagagtacaagatt
actggcttgagtgaacaattgtgcaaggatcagttgttctcaatgaagcaaaaaaatgca
aaaaatgaaaatggtgaagctgagacactggagattactatttatgattattttgttaac
catcgcaacatacagttgcgttattctgctgatttgccgtgtattaatgttgggaagcct
aagaggccaacatatattcctattgagctttgctctttggtgtctttgcaacgctacact
aaggcactatccactttccaaagagcttccctggttgaaaaatcgaggcagaaacctcag
gaaaggatgaatgttttatctaatgttttacgtaccagtaattatggtgctgaaccaatg
ctgaaatcttgtggtgttaatatcagctctaatttcacccaagtggatggacgaattctg
ccagcaccaaggttgagagtgggcaatggtgaagatttctttccaaggaatgggcgttgg
aattttaacaacaagaaattggtggagccatctaggattgaaagatgggctgttgtgaac
ttctcggctcctcgttgtgatccaaacaacattgcaagggatttgattcgttgtggagaa
atgaaaggaattcgtattgatcccccatttgatatattcaatgagatgaaccagaataga
cgcctttcacctgtggttagagttgaaaaaatgtttgagcagatacaatctaaacttcct
ggagctccgcagttccttctttgtctgcttcctgataggaaaaactctgatctttatggg
ccatggaagcggaagaatctttctgagtatggcatcgtgactcagtgtatggcaccagct
agggtgaacgatcaataccttacaaatcttcttctgaagatcaatgctaagcttggaggt
ctgaattcaatgctaactattgagcaaacaccttcaatccctatgatttcaaaggttcca
actatcatccttggaatggatgtatctcatggttctcctgggcagtctgatgtgccttca
atagctgcggtggttagctccaggcaatggccattgatttcccgctatagggcatcagtc
cgtacacagtctccgaagcttgaaatgatagattctcttttcaaaccagtttctgacaaa
ggggatgagggtatcatgagggaggctctcttagacttttatacaagttcagggaagagg
aagcctgatcagatcattattttcagggatggggttagcgagtctcagttcaatcaagtt
ttgaacaaagaacttgatcaagttattgaggcttgcaagttccttgacgagaattggaac
cctaagtttgtggttattgttgcacaaaaaaaccatcataccaagtttttccagcaggga
tctcctgacaatgttttacctggtactgtaattgacaacaaagtatgccatccgaagaac
aatgatttttacctttgtgctcatgctggaatgatagggaccacaaggccgacccactat
catgttctcttagaccaggttgggttttcagctgatgatctgcaggagcttgttcattct
ctatcctacgtgtatcaaaggagcaccacagccatatctgttgtggcccctatttgctac
gctcatttggcagcttcacagttggggcaatttatgaagtttgaggatgcttcagagaca
tcatcgagccatggtggggtgactgctccgggagcaatttctgtacctcagcttcccagg
ttgaaggataatgtcagcagctccatgttcttctgctga
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