Gossypium arboreum (tree cotton): 108453275
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Entry
108453275 CDS
T05776
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108453275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108453275
04147 Exosome [BR:
gab04147
]
108453275
04090 CD molecules [BR:
gab04090
]
108453275
Enzymes [BR:
gab01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108453275
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108453275
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108453275
CD molecules [BR:
gab04090
]
Proteins
108453275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_15
AAA_30
AAA_5
nSTAND1
APS_kinase
AAA_25
DUF87
Rad17
DUF5639
DUF1360
Motif
Other DBs
NCBI-GeneID:
108453275
NCBI-ProteinID:
XP_017606773
UniProt:
A0A0B0PU69
LinkDB
All DBs
Position
9:79063064..79069885
Genome browser
AA seq
1363 aa
AA seq
DB search
MSQDLEEVKTIEQWKWSEMQGLELVSASPSDPFKTNPSTPTLTPTHLTNKTQQQSPAEAQ
GSAGGERREMETSAASSSSETKKEGSNNGSGEKPGDVPSVGFGELFRFADGLDYVLMGIG
SLGALVHGCSLPIFLRFFADLVNSFGSNANNMDKMMQEVLKYAFYFLVVGAAIWASSWAE
ISCWMWTGERQTTKMRIKYLEAALDQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLG
NFIHYMATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGAIHTTTLAKLSTKSQEALSQGG
NIVEQTVVQIRVVLAFVGESRALQAYSSALKVAQKIGYKTGFAKGMGLGATYFVVFCCYA
LLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGLGQSAPSMSAFVKAKVAAAKIFRIIDN
KPGIDRNSESGLELESVTGLVELKNVDFAYPSRPDVRILNNFSLTVPAGKTIALVGSSGS
GKSTVVSLIERFYDPSSGEVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLG
RPDANQIEIEEAARVANAHSFIVKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAI
LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGT
HDELIAKGENGAYAKLIRMQEMAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSP
YSRRLSDFSTSDFSLSLEASHPNYRMEKLAFKEQASSFWRLAKMNSPEWVYALVGSIGSV
VCGSLSAFFAYVLSAVLSVYYNPDHAYMRREIGKYCYLLIGLSSAALLFNTLQHSFWDIV
GENLTKRVREKMLTAVLKNEMAWFDQEENESARISARLALDANNVRSAIGDRISVIVQNT
ALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDLEAAHAKATQLAGEA
IANVRTVAAFNSENKIVGLFSSSLQTPLRRCFWKGQIAGSGFGVAQFSLYASYALGLWYA
SWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFVKGGRAMRSVFDLLDRKTEIEP
DDPDATQVPDRLRGEVELKHIDFSYPSRPDVPIFRDLNLRARAGKTLALVGPSGCGKSSV
IALIQRFYEPSSGRVMIDGKDIRKYNLKSLRKHIAIVPQEPCLFASTIYENIAYGHESAA
EAEIIEAGTLANAHKFISSLPEGYKTFVGERGVQLSGGQKQRIAIARALVRKAELMLLDE
ATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSYLL
KNYPDGCYARMIQLQRFTHSQVVGITSGSSSSAKPKDDNEREA
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagatttggaggaggtaaagacgatagagcaatggaaatggtccgaaatgcaa
ggccttgaacttgtgtctgcttcaccttctgacccttttaaaaccaatccttccacccca
actctaactcctacacacttaacaaacaaaactcaacagcaaagtccagctgaagctcag
ggaagtgcaggaggggagagaagagaaatggaaacttcagcggcttcttcttcatctgag
acgaaaaaagaagggagtaataatggtagtggggagaagccaggggatgttccttcagtt
ggttttggtgaactgtttagatttgctgatggtttggattatgtgttgatgggaattggg
tcacttggagctctcgtacacggctgttctttgcctatattccttcgtttctttgccgat
cttgtcaattcttttggttctaatgctaataacatggacaagatgatgcaagaagtttta
aagtatgcattttacttccttgtggtgggtgctgcaatttgggcatcttcgtgggcagaa
atatcgtgttggatgtggactggagagaggcaaaccacaaagatgaggatcaagtactta
gaagcagctctggaccaggatattcaatactttgacactgaggttagaacttctgatgtt
gtgtttgccatcaacactgatgcagtgatggtccaggatgccattagcgagaagttgggc
aatttcattcactacatggcaacctttgtgtctggttttgtggtgggttttacagcagta
tggcaattggctttggtcacactcgcagtggttcctctcattgctgtgattggagcaatc
cataccaccacattggccaagctctctacaaaaagccaagaagctttatcacaaggaggg
aatattgtggaacagacagtggtccaaattcgagttgtgttggcttttgttggtgaatca
agagcattacaagcctactcctcagcattaaaggttgcacaaaagattggttacaaaact
ggatttgcaaagggaatgggattaggggcaacttactttgtcgtcttttgttgttatgct
cttcttctttggtacggaggttatctggttaggcatcattacaccaatggaggacttgcc
attgccactatgtttgctgttatgattggtggattgggtttggggcaatctgcaccaagc
atgtccgcatttgtgaaggccaaagttgcggcagcgaaaatcttccgtataattgataac
aaacccgggatcgataggaatagtgagtcaggtttggagttggagtctgttactggtcta
gttgaactgaaaaatgtggattttgcatatccatcaaggccagatgtaaggatccttaac
aatttctccctaactgttcctgccggcaaaaccatagctttggtaggaagcagtggttcg
ggtaaaagtaccgttgtctcccttattgagagattctacgatccctcctcaggagaagtg
ctgttagatgggcacgatataaagacattaaagctcagatggttgaggcaacaaatagga
cttgtgagccaagagcctgctctctttgccaccaccattaaagaaaatattcttttgggt
agacctgatgctaaccaaattgagatcgaagaagctgccagagtggccaatgcacattca
ttcatagtaaagcttcctgatggctttgacactcaggttggggagagaggacttcaactc
tcaggtgggcagaagcagagaattgctatagccagggcaatgttgaaaaacccggcaatc
ctactcttggatgaagcaactagtgctctagattccgagtcagaaaagttggttcaagag
gctcttgatcgtttcatgattgggaggacaactcttgtaattgcccatcgcctttccact
attcgcaaggctgatcttgtagctgtgctccagcagggaagtgtttctgaaattggaaca
catgatgaactcattgccaaaggagaaaatggtgcctatgccaagctcatccgaatgcaa
gaaatggcacacgaaactgcccttaacaatgctcgaaaaagtagtgcaaggccttctagt
gccaggaactcagtaagctctccaattatagcccggaattcatcatatggccgatcacca
tattcacgaaggctttctgacttctctacttctgactttagtctttcccttgaggcctca
caccctaattaccgaatggaaaagcttgccttcaaggagcaagctagttccttttggcgc
cttgccaaaatgaattctcctgaatgggtttatgctttagttggttctataggctctgtt
gtctgcggatccctcagtgctttctttgcatatgtgctaagtgctgttctcagtgtctac
tacaacccggaccacgcttacatgagaagagaaattgggaaatactgctatttattaatt
ggactttcgtccgctgctcttctctttaacacactgcagcattccttttgggatattgtg
ggagaaaacctcacaaaacgtgtgagagagaagatgctgacagctgtgctgaaaaacgaa
atggcatggtttgatcaagaggaaaatgagagtgctaggatttctgcaaggctggctctt
gatgccaacaatgtcagatcagctataggagatcgcatttcagtgattgtgcagaacacg
gctctcatgttagttgcctgcactgccggctttgttttgcagtggcgccttgcccttgtc
ctaattgcagtcttccctgtggttgtagcagcaactgttttgcagaaaatgtttatgaaa
ggtttctcaggagatttagaagctgctcatgccaaggctacgcaactagctggggaggct
attgccaatgtaagaactgttgctgccttcaattcagagaacaaaattgttggcctattc
tcttcaagccttcaaactccattgaggcgctgcttctggaagggtcaaattgcgggaagt
ggatttggtgtagctcagttttcactatatgcttcttatgctcttggtctttggtatgct
tcctggcttgtgaagcatgggatctctgatttttcaaagacaatccgagtctttatggtt
ctcatggtttccgccaatggtgcagctgaaacattgaccctggctcctgacttcgtcaag
ggaggtcgagccatgcggtcggtctttgatcttcttgaccgtaaaactgagatagagcct
gatgaccctgatgccacacaagttccagaccgccttcggggagaagttgaactaaagcat
attgacttttcttatccctcgcgtcctgatgtcccaatcttccgtgaccttaatcttcgt
gcccgagctggaaaaactcttgcccttgtcggtccgagtggatgtggtaagagctcggtc
attgcacttattcagagattctatgagccctcatctggccgtgttatgattgatggaaag
gacatccggaagtacaacctcaaatccttgagaaaacacatagcaattgttccacaagag
ccatgcctctttgcttccaccatttatgaaaacattgcctatggacatgagtcagctgct
gaggctgaaatcattgaggcaggtaccctagccaatgcccacaagttcatatcttcactt
cccgaaggttacaaaacgtttgtcggggagagaggagttcaactttccggaggccaaaaa
caaagaattgccattgcaagggctcttgtgaggaaggcagagcttatgctgcttgatgag
gcaacaagtgcccttgatgccgagtctgagagatcggtccaagaggctctagaccgtgcc
tgctctgggaaaactacaatagtggttgctcataggttgtcgacaattcggaatgctcat
gtcattgcagtgatagatgatgggaaagttgcagagcaaggatcccattcatatttactt
aaaaattatcctgatgggtgttatgcccgcatgatacaattacaaaggtttacacatagc
caagttgttggaattacatccggctcaagttcttcagctaaaccaaaagatgacaatgag
agagaagcctag
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