Gossypium arboreum (tree cotton): 108453311
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Entry
108453311 CDS
T05776
Name
(RefSeq) auxin response factor 6-like isoform X1
KO
K14486
auxin response factor
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108453311
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
108453311
NCBI-ProteinID:
XP_017606825
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Position
5:12121133..12128229
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AA seq
907 aa
AA seq
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MRLSSAGFSPQATEDVAGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAAST
NKEEVDVHVPNYPSLPPELICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKEAYLPAEL
GTPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE
WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP
SSVLSSDSMHLGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLTKYIKAVYHTRVSVGM
RFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEI
EPLTTFPMYPSPFPLRLKRPWPAGLPSFHGIKDDGLGMNSPLMWLQGDAGRGMPSLNFPG
IGVTPWMQPRLDAASMLGLQNDMHQAMAAAALQDMRAVDPSKSATTTLLQFQQPQNLSCR
PAALMHSQMLQQSQPQAFLQGVEDNQHQSETQAQTQPPLVQQQLQQQNSFNNHQHQQQLQ
HPLSQQHQQLVDHQHISTGVSAMSQYAPASQSRSSPFQAIPSLCQQQSFSDSNGHTVTSP
IVSPLHSLLGSFPQDEPSGLLNLPRSNPVITSAAWPSKRAAVEVLSSGSPQCVLPQVEQL
GPTQTNISHNSISLPPFPGRECSIDQAAGTDPQSHLLFGVNIETSSLLLQNGMSSLRGVG
SESDSTTIPFSSNYASTAGTDFSVNPAMTPSSCIDELGFLQSPENVGQENPQTRTFVKVY
KSGSFGRSLDISKFSSYNELRSELARMFGLEGQLEDPLRSGWQLVFVDRENDVLLLGDDP
WPEFVNSVWCIKILSPQEVQQMGKRGLELLNSVPVQRLSNGSCDDYASQQDSRNLSSGIA
SVGSLDY
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaggctttcttcagctggtttcagtccacaagctacggaagacgttgcaggagagaag
agagttctgaactctgaactttggcatgcatgtgcgggtcctcttgtatctctacctccg
gttggaagtagggttgtttacttcccacagggtcatagcgaacaggtagctgcatcaacc
aacaaggaggaagtggatgtccacgtacctaactacccaagcttacctccagaacttata
tgtcagctccataatgtcaccatgcatgcagatgttgagacagatgaagtatatgcacaa
atgacattgcaaccactgaatccgcaagaacagaaggaggcttaccttccagcagaattg
ggcactcccagcagacagccaacaaattatttctgtaaaacattaacagccagtgacaca
agcactcatggagggttctctgttcctcgccgagctgctgaaaaagtgtttcccccactg
gacttctcccagcagcctcctgctcaagagttgattgcaagggacttacacgataatgaa
tggaaatttaggcatatatttcggggtcagcccaaaaggcatctcttgacaacaggatgg
agcgtatttgtaagtgctaaaagactagttgcaggtgattcagttctttttatctggaat
gaaaaaaatcaattacttcttggcatccgacgagctaatcgacctcaaactgtaatgcct
tcatctgttttatcgagtgatagcatgcacttagggcttcttgctgctgctgctcatgca
gcttcaacaaatagccgcttcactatattttataacccaagggctagtccatcagaattt
gtaatacctttgacaaaatatatcaaagctgtctatcatactcgagtttctgttggtatg
cgctttagaatgctgtttgaaacagaagaatcaagtgttcgtcgatacatgggtacaatc
actggcataagtgacttggatcctgtccggtggccaaattcacattggcgatcagtcaag
gttggctgggatgaatcaacagctggagaaaggcagcctagagtctccttgtgggagatt
gaaccattgacaacattccctatgtatccatcaccatttccattaagacttaagcgacca
tggccagcaggattaccttctttccacggcatcaaggatgatggtctaggtatgaattct
ccgcttatgtggctgcaaggagatgcaggtagaggaatgccatctctgaattttccaggg
attggagttacaccgtggatgcagccaaggctggatgctgcttccatgctgggtttgcag
aatgacatgcaccaagctatggctgctgctgctctgcaagacatgagagcagtggatccc
tccaaatcagcaactactacccttctgcaattccagcaaccccaaaatctatcctgcagg
cctgctgctttaatgcattcccagatgttgcagcagtctcagcctcaggcttttcttcag
ggtgttgaagacaaccaacatcagtctgagactcaggctcaaacccaaccgcctcttgtt
cagcaacaattgcagcagcagaattcatttaataaccatcaacaccaacagcagttacag
catccgctgtcacagcaacaccagcaactggtcgatcatcagcatatttctactggagtg
tctgccatgtcacagtatgctccggcctcacagtcccggtcgtcacctttccaagccata
ccttcactatgccaacaacagagtttttctgactcaaatgggcacaccgtgaccagcccc
attgtatctcccttgcacagtcttttgggatcctttccccaagatgaaccgtctggtctg
ctcaacttgcctagatccaacccagtaataacatctgcagcatggccatctaagcgggct
gctgttgaagttctgtcatctggatctccacaatgtgttctgccccaggtggaacagttg
gggcccacccaaacaaacatttctcataattctatttcgttgccaccctttcctggcagg
gagtgctcgatagaccaagcagcgggtactgatccacagagccatctcttatttggtgtt
aatatagagacttcatctcttctattgcaaaacgggatgtcaagccttaggggagttggc
agcgagagtgactccactactatacctttctcttctaattatgcgagtactgcaggcact
gatttttcagttaatccagcaatgacaccttccagttgcattgatgaattgggattcttg
cagtctccagagaatgtgggccaagaaaacccacaaaccagaacctttgttaaggtttat
aaatcagggtccttcgggaggtcgttggatatctccaaatttagcagctacaatgagctg
cgcagtgaacttgcacgcatgtttggccttgaaggccagttggaggaccctttgagatca
ggctggcagcttgtatttgttgatagggagaatgacgttcttctccttggtgatgatcct
tggccggagtttgtgaacagtgtgtggtgcatcaagatactttcaccgcaagaagtgcag
caaatgggcaaacgaggcctggagcttctaaactctgttccagttcagaggctctcgaat
ggcagttgtgatgactatgcgagccagcaggactcgagaaatttgagctctggtattgcc
tctgtggggtcattggactactga
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