Gossypium arboreum (tree cotton): 108453322
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Entry
108453322 CDS
T05776
Name
(RefSeq) protein NPGR1-like isoform X1
KO
K21843
tetratricopeptide repeat protein 7
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108453322
Membrane trafficking [BR:
gab04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
108453322
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_1
TPR_12
TPR_11
TPR_8
ARM_TT21_C
TPR_17
TPR_9
BsuPI
TPR_4
Motif
Other DBs
NCBI-GeneID:
108453322
NCBI-ProteinID:
XP_017606840
UniProt:
A0A0B0NYN4
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All DBs
Position
5:19067111..19070961
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AA seq
712 aa
AA seq
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MLCACSGEQFKFEDAPQSPESLATRDFSASGLSSLTGDWESKLEDVQVDEVESTLKEALS
LNYEEARALLGRLEYQRGNFDAALQVFQGIDIKGLTPRMTTAIVERTRLRKSRSKADIIP
PSVMSMHSVSLLLEAIFLKAKSLEELGHIKEAAKECKLILDVVEAALPNGMHEGIAEDCK
LQEMFHRALELLPNLWIKIGYLNEAITAYRRALIKPWNLDSQRLASVQKNLAAMLLYGGV
ETSLPPPLRVWGLTTPNCIEEAILLLLALMQKVAFGEIKWDAEIMDHLNFALSVSGHFEL
LAAHVEQVSPGIYERADRWYFLALCYAAAGQNEVALNLLKKVSSQSEAKREPDILALLLG
AYISSQDPKHAHDGITFARYVIDLEDEMNGHFKAQAHKFLGICYGNAARISISDSERALF
LKESLSSLNYAAFNMKEDPEVMFNLSLENAVQRNLDLAFDNAMKYSSVVAENSGRGWKLL
ALILSADRRFKDAETILEFALDEASGSDQFELLRLKAVLQIAQERPKQAIETYSILLSQI
QAQREAQSNNSGHAKSSHTENIAERNMEMAVWQDLATVYTKFGSWPDAEICLNNAKSIEF
YSPKSWHTTGLLFEAQSLYKEALVSFSVSLSIEPDYVPIIVSTAAVLIKLGGQSLPVARS
FLMNALRLDPTNHDAWMNLGLIAKMEGSLQLAADYFQAAYELKLSAPVEAFT
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgtgcttgttcaggtgaacagttcaagtttgaagatgctccacagtcgccggag
tctttagcaaccagagatttctcagccagtgggctgtcgtctctgaccggagattgggaa
tccaagctcgaggatgttcaagtggatgaagttgaatccactctcaaagaagctctctcc
ttaaactacgaggaagcaagggcactgttggggaggctcgagtatcaaagagggaatttc
gatgctgcgcttcaggtttttcagggtattgacatcaaaggtttgacaccaaggatgact
acggctattgttgagaggacccggctacgcaaatcacggtccaaagctgacattatccct
ccttctgtgatgtcgatgcactcagtgagcttacttctggaagccattttcttgaaagca
aaatcgttggaggaacttgggcatattaaagaggctgcaaaggagtgcaagctaatttta
gatgtagttgaggctgcactgcctaatgggatgcatgagggaattgctgaagattgcaag
ttacaagaaatgtttcacagagcattagaactgctccctaatctatggattaagataggc
tatctcaatgaagctataactgcgtatcgtcgggctttaatcaagccatggaatttggat
tcccagaggttagcaagtgtacaaaaaaacttagctgccatgctactttatggtggtgtt
gaaaccagcctcccacctcctttacgtgtatggggcttaactacccctaattgtattgag
gaagcaattcttctccttctagcactaatgcaaaaagtggcatttggagaaataaagtgg
gatgcagaaattatggatcatctcaactttgctctctcagtttctgggcacttcgagtta
cttgcagctcatgtggagcaggtctctccaggcatatatgaaagagctgacaggtggtac
tttcttgctctctgttatgctgctgctggtcagaatgaagtggcattgaacttattaaag
aaggtttccagtcagtctgaagcaaagcgcgagcctgatatccttgctttactgcttggt
gcttatatatcttcgcaagatccgaagcatgctcatgatggaataacatttgctcgttat
gtgattgacttggaagatgaaatgaatggacatttcaaggctcaagcccataagttcctt
ggcatttgctatgggaatgctgctagaatttccatatcagattctgaaagagctctcttc
ctgaaagaatctttgagctctcttaactatgctgctttcaacatgaaggaagatcctgaa
gtgatgtttaacctcagtttggaaaatgcagttcagaggaatttagatttggccttcgac
aatgcaatgaagtactctagcgtggtggctgaaaactcaggaagaggttggaagctatta
gcattaatactttctgcagacaggcgcttcaaagatgctgaaaccatacttgaattcgct
ttagatgaagccagtggatcagatcaattcgaacttctaagactgaaagctgtgcttcag
attgctcaggaacgacccaagcaagcaattgaaacttatagcatcttgctatctcagatt
caagcacaaagagaagctcagtctaataactctggtcatgcaaagagttcccatacagag
aatatagctgaaagaaatatggaaatggcagtctggcaggatctagctactgtttacacc
aagtttggttcgtggcccgatgcagaaatttgtttaaacaatgccaagtcaattgaattt
tattcacccaaaagttggcatacaacaggtttgttatttgaagcccaatcactttataaa
gaggccctggtatcattctcagtctcactgtctatagaaccagattacgtgcccatcatt
gtttcaaccgcggcagtactcataaaactgggtggtcaatcactcccagttgcaagaagc
tttctaatgaatgctcttcggttagatcctacaaatcatgatgcatggatgaaccttgga
ttgattgccaaaatggaaggctcattacaactagcagcagactattttcaagcagcctat
gagttgaagctatcagcacctgttgaagccttcacatga
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