Gossypium arboreum (tree cotton): 108453397
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Entry
108453397 CDS
T05776
Name
(RefSeq) alkylbase DNA glycosidase-like protein mag2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108453397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108453397
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
108453397
DNA repair and recombination proteins [BR:
gab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108453397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
108453397
NCBI-ProteinID:
XP_017606962
LinkDB
All DBs
Position
5:complement(25121408..25125429)
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AA seq
396 aa
AA seq
DB search
MGEQASGQPQPQAQSQPSNDSSDATQCQTQRQAQTQTKTENSNDAFAAAVPTVTTALVVS
ASTELTGGSPLTSSPPSKIPSRPRKIRKLSPDSNSEPNASQQATTSTTSTSVAVPLKTVP
RAPKAKLSQHRALVVAPQFFARSLSCEGEVETAVRHLRNADPLLASLIDLHPPPTFDTFQ
TPFLALTRSILYQQLAFKAGTSIYTRFIALCGGENGVVPETVLSLTPQQLRQIGVSGRKA
SYLHDLARKYQTGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN
DLGIRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAG
ASLQPLPQEEHQHQQQPQLLDPINSILDLGACTWGQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaacaagcctcgggacagcctcaaccacaggctcaatctcagccttcaaacgac
tcttccgacgcgacccaatgccaaacccaaaggcaagcccaaactcaaactaaaactgaa
aactcgaatgatgccttcgccgccgctgttcccaccgttactaccgccctcgttgtctct
gcttcaacggaactcaccggtggttctccccttacatcctctcctccttctaaaatccct
tctcgccctagaaaaatccggaaactctcccctgactcgaattccgaaccgaatgcctcc
caacaagcgacgacttccacaacatcaacatccgtagcggtgccgcttaaaaccgtcccc
agagctcccaaagcaaaactcagtcagcatcgagccctagtggtggctccccaattcttt
gctcggtccctctcttgtgaaggcgaggttgaaaccgccgttcgacacctccgtaacgcc
gatccccttcttgcttcgttgatcgatctccatccgcctccaaccttcgacactttccaa
acccctttcctcgctctcacccgaagcattctctaccaacagctcgctttcaaagctgga
acttccatctacactcgcttcatcgctctctgcggcggcgaaaacggtgtcgttcccgag
actgttctttccttaacccctcaacagctacggcagattggtgtctcaggacgaaaagcg
agttaccttcacgatctcgcgaggaaataccagacggggatattatcagactccgcgatt
gtaaatatggatgataagtcactttttaccatgcttactatggtcaatgggatcggttct
tggtccgttcatatgtttatgatcttctcgcttcatagacccgatgttttaccgattaat
gatctcgggattcggaaaggggttcagttactctacagtttggaggagttgccgaggcct
tcgcagatggatcaattgtgtgagaaatggaggccttataggtcagttgcttcgtggtat
ctctggaggtttgtggaggccaaaggagcaccttctagtgcagctgctgttgctgctggt
gctagtcttcagccactgccgcaagaggagcatcaacatcagcagcagccccagcttctc
gatcccattaatagcattctggaccttggggcctgtacttgggggcaatga
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